DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and sek-1

DIOPT Version :10

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_509322.2 Gene:sek-1 / 181043 WormBaseID:WBGene00004758 Length:336 Species:Caenorhabditis elegans


Alignment Length:336 Identity:90/336 - (26%)
Similarity:156/336 - (46%) Gaps:48/336 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 GPSSQVAGNQIAVPQAAVAPAATPNTRAANAKKKKMSDE-EILEKLRTIVSVGDPNRKYTKMEKI 572
            |...::.|.:|.:|    .|..||.....:....|:::| |.:|...|.:.|         :|::
 Worm     5 GRERKLPGMKIVMP----TPVETPTMNLEDRCLIKLTNESEEIEIAATDLVV---------LEEL 56

  Fly   573 GQGASGTVYTAIESSTGMEVAIKQM--NLSQQPKKELIINEI-LVMRENKHPNVVNYLDSYLVSE 634
            |:|..|.|.......:|:.:|:|::  :::.|.:|:: :||: ...|.:..|.:|.:..:.....
 Worm    57 GKGGYGIVEKMQHRQSGIIMAVKRIKSSINDQSQKQM-LNELDACRRSDCCPQMVRFYGAMFREG 120

  Fly   635 ELWVVMEYLPGGSLTDVVTETCMD--------------EGQIAAVCREVLQALEFLHAN-QVIHR 684
            ::|:.||          |.:|.:|              |..|..:...|::.|.|:... .:|||
 Worm   121 DVWICME----------VMDTSLDKFYRHAYKIGKHIPEPFIGKMALSVIEGLNFMKEQLNLIHR 175

  Fly   685 DIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVV---TRKQYGPKVDLWSL 746
            |:|..||||...|.||:.|||....::...:| |...|...:|.||.:   |:..|..:.|:|||
 Worm   176 DVKPSNILLNRHGQVKICDFGISGHLTNSMAK-TVQAGCKPYMPPERIDGETKSAYDVRADVWSL 239

  Fly   747 GIMAIEMVEGEPPYLN-ENPLKALYLIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALD 810
            ||..||:..|..||.| :.|.:.|..:.....|::..:...|...|.|:.:|||.:.:.|....:
 Worm   240 GITIIEIAVGTHPYANWKTPFEQLKQVVKEPPPKLPMESGFSVDCQYFVKRCLEKDYNERPKYPE 304

  Fly   811 LLKHPFLKLAR 821
            ||..||::.||
 Worm   305 LLAMPFMEQAR 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..139 CDD:395634
STKc_PAK_I 558..818 CDD:270814 76/281 (27%)
sek-1NP_509322.2 PKc_MKK3_6 48..328 CDD:173729 79/289 (27%)
Blue background indicates that the domain is not in the aligned region.

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