DRSC/TRiP Functional Genomics Resources

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Protein Alignment msn and KIC1

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_011970.1 Gene:KIC1 / 856502 SGDID:S000001144 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:1316 Identity:306/1316 - (23%)
Similarity:491/1316 - (37%) Gaps:378/1316 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKV--MDVTEDEEEEIKLEINVLKKYSNHRNI 89
            |.:.:|:..||:|.|.:|.||||.:.|||::.||||  :|...||.|:::.||..|.......||
Yeast    18 DVSSLFKRTEVIGRGKFGVVYKGYNVKTGRVYAIKVLNLDSDSDEVEDVQREIQFLASLKQISNI 82

  Fly    90 ATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSN 154
            ..|||:::      ||..||::||:|..||:..|::..|   :.|::|..|.||:|..|..:|.:
Yeast    83 TRYYGSYL------KDTSLWIIMEHCAGGSLRSLLRPGK---IDEKYIGVIMRELLVALKCIHKD 138

  Fly   155 KVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDN 219
            .|||||||..|||:|:...|||.||||:||:::|..||.|..|||||||||||.    ....||.
Yeast   139 NVIHRDIKAANVLITNEGNVKLCDFGVAAQVNQTSLRRQTMAGTPYWMAPEVIM----EGVYYDT 199

  Fly   220 RSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLKSKKWSKKFHGFIDTVLVKDYHQR 284
            :.|:||||||..|:|...||.||:..:||:.||.::.||||:.:.:|.....||...|.:|..:|
Yeast   200 KVDIWSLGITTYEIATGNPPYCDVEALRAMQLIIKSKPPRLEDRSYSTSLKEFIALCLDEDPKER 264

  Fly   285 PYTENLLKHGFI---KDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGS--DNDDDEPQLAG 344
            ...::|||..||   |..||.     .||:.|.|....: :|.:..|:..||  :|:..:|..|.
Yeast   265 LSADDLLKSKFIRAHKATPTS-----ILKELISRYLLFR-DKNKNKYKIEGSIPENEPSKPSEAP 323

  Fly   345 EHSSIVQAPGGDTLRRN-------FQQIQEGRL----------AAEQQQQHHLMAQAQAQAAAAH 392
            :.|   |..|||..:::       .:::.||.:          :::...::::...|.|:.....
Yeast   324 KPS---QNGGGDEAQKSIASNDNEIKRVNEGDVEMKWDFDSLSSSDYIIENNINLDALAEDNNEW 385

  Fly   393 AAAQAQAQLQQQQQQAAAAAAAAAHAAQ------------QAQQAAQQAQAQQPQANR--QPKPP 443
            |.||..........:.:......:|..:            .....||.:....|..|.  ..|.|
Yeast   386 ATAQHDLFNYAYPDEDSYYFDPTSHNTRPFVYQGTTIGKGYPGTIAQNSTLNAPVTNNYTNSKYP 450

  Fly   444 SR--------QQVEEPGP-------PARPPQRLI-------VVPDPPHANRPLPPTPK--CGEPA 484
            |:        ......||       .::.|::|:       ::......|...|...|  ....|
Yeast   451 SKMVAGTTNTSGTHTAGPMTSSKRLESKAPKQLLELFEDNEIITAENDVNTEAPKISKSISSLNA 515

  Fly   485 GQTPQQQQRNSQNNFKPSLPPRRPEPQPQTAAGGQGSQQQAQPEAPPRNNRQSSGLSSSGGSASG 549
            |       .:|:::|.||:         .....|..:..:.:|..||        |||.....| 
Yeast   516 G-------NSSRDDFIPSI---------SNEVNGNINNNKMRPHLPP--------LSSGNNYYS- 555

  Fly   550 GGGSSKPAAALPQQSNNHL--GQPVNPLDPLDSSDSDSEPDE-PNDRARNDGTLLASDPPKPLPG 611
               .|.||..|.|...|..  |.|.:.|....:|.....|:| ||......    ||..|..:|.
Yeast   556 ---QSTPALPLLQTKFNKTSKGPPTSGLTTAPTSIEIEIPEELPNSALPTP----ASADPVLIPS 613

  Fly   612 LGPVSEDANTTTPLSHGS---GGPPNRPLPPTPDDDDQAGDRTLIMKRKLEQNINRLQKSASTSQ 673
            ....|......||.|..|   ..|.|.|...|..::......:.|..:||...:      ||.|.
Yeast   614 TKARSSTVTAGTPSSSSSIQYKSPSNVPRRLTVSNNRPEHCPSTITNQKLGSAV------ASNSG 672

  Fly   674 ANVTPSRRGDESNLLRDWDFDRFFPKNANGPRGSGRGSPTT--TASLSRSSQLSTLKVDTKLQRA 736
            .:.||:...:.:|     :.|   .:|:.|..||...:.|.  ..:....::|||.|        
Yeast   673 ISSTPNNSNNYNN-----NTD---SENSRGSSGSNTANSTQMGITNPGNVTKLSTHK-------- 721

  Fly   737 SVAEAITRPV----------PRG---------------YQPLKAEPSA----SQSIAKEQGSASG 772
              |.:.:||:          |.|               ..|...:|.|    ::.|..:..::..
Yeast   722 --ASSPSRPLFGVGTSPNRKPAGSPTQNIGHNSTHTNLAPPPTMKPMANSKDNKDILLQPLNSIP 784

  Fly   773 SGSGSGSASGSGSGGSTNSPAHKRQDSDSRLPTNFERGFRRENSDFFPLAKRYSAVFSGASASGS 837
            |.|...:.||:.|...|:|.....:...||:           |.||    ||             
Yeast   785 SSSTLNTISGNSSNNLTSSNYFSNEKEGSRV-----------NGDF----KR------------- 821

  Fly   838 TAGSPSAQALQRSSAVYQRNSIYSSSISSKSKENDVPGAPGAAA------AGTATASAKPGPAAA 896
              .:|:.:..........||.:...:.::....|.:||:.|.:.      .|..|:||...|.:.
Yeast   822 --NNPNLKLQMPLPTPVVRNKLLDPNTATSQNNNGMPGSAGISTNENINQFGFNTSSASNIPVSM 884

  Fly   897 TTTATK----GAAPKTSKSLANFHFLRPRREKTESVIVLQNAAVRAQRLQQLQQQQQQQQLQQQQ 957
            |..:.|    |...|.|:|::|                                           
Yeast   885 TPISEKHIDFGGKIKRSQSISN------------------------------------------- 906

  Fly   958 QQQNRGGGGGGGGGGGGGGSSGVGADGTGLGTPGTRTSSVLPDLLSQASPATPPRHDKSSSEEYQ 1022
                                                                  |.:.|:||...
Yeast   907 ------------------------------------------------------RKNSSASEHPL 917

  Fly  1023 AAISSSVHSTPSKSFIASSGSGGLGLGGGTVVGGVIISSNHSPQSTISLASSSSNSRQNSPKNSI 1087
            ..:.|||             ||.:...|...||.   ::|..|.:::.|::::.|:...:...:|
Yeast   918 NILGSSV-------------SGNVSGIGNNNVGS---NNNSGPNNSVPLSANTGNTTIKANSTTI 966

  Fly  1088 SKTRS-SSSITNLLHKSASSSSANLHHLTPCSSTSSASISN---PLPPHAYALQQKQ----RSFL 1144
            :.:.| ::|.|..:.:....|....:|:...::|::.|:::   .:.|...:||.:.    .|||
Yeast   967 ATSSSAAASTTAPISQQTIPSGTQFNHILSSAATAANSVNSLGFGMCPPPQSLQMEMFLDLESFL 1031

  Fly  1145 TFGFGAGGSGPSRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGL 1209
                    .|..||               .:..|::.|..:              |||...|.||
Yeast  1032 --------PGKQRR---------------VDRKPQVLKELE--------------NLLQMFEEGL 1059

  Fly  1210 MLLDRSGQGKVYQLIS 1225
            ..::.:.:   .||||
Yeast  1060 PCIEHALK---EQLIS 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 116/270 (43%)
S_TKc 32..296 CDD:214567 115/265 (43%)
CNH 1183..1484 CDD:214481 10/43 (23%)
KIC1NP_011970.1 STKc_NAK1_like 21..295 CDD:270822 124/291 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 258 1.000 Inparanoid score I639
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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