DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and CDC15

DIOPT Version :10

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_009411.2 Gene:CDC15 / 851274 SGDID:S000000072 Length:974 Species:Saccharomyces cerevisiae


Alignment Length:377 Identity:121/377 - (32%)
Similarity:192/377 - (50%) Gaps:53/377 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DDIDLTALK---DPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEE-EEIKLEIN 78
            |.::||.::   :.:..:.|.:|:|.|:||.|||..:..|.|:.|||.:....||| .:|..||:
Yeast     8 DRVNLTPIQRASEKSVQYHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYENDEELNDIMAEIS 72

  Fly    79 VLKKYSNHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLV-KSTKGQSLKEEWIAYICR 142
            :||.. ||.||..|:| ||:||     .:|::::|||..||:..|: :|:.|.| :.|...|:.:
Yeast    73 LLKNL-NHNNIVKYHG-FIRKS-----YELYILLEYCANGSLRRLISRSSTGLS-ENESKTYVTQ 129

  Fly   143 EILRGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVI 207
            .:| ||.|||...|||||||..|:||:.:..|||.|||||..::.:   ..|..||..|||||::
Yeast   130 TLL-GLKYLHGEGVIHRDIKAANILLSADNTVKLADFGVSTIVNSS---ALTLAGTLNWMAPEIL 190

  Fly   208 ACDENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNS--PPRLKSKKWSKKFH 270
            .   |..|:  ..||:||||.|.:||....||..:|......:.:..::  ||    ..:|:...
Yeast   191 G---NRGAS--TLSDIWSLGATVVEMLTKNPPYHNLTDANIYYAVENDTYYPP----SSFSEPLK 246

  Fly   271 GFIDTVLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDN 335
            .|:....||:.::||..:.||||.:|......:         :|:..|.|::....||.:. :|.
Yeast   247 DFLSKCFVKNMYKRPTADQLLKHVWINSTENVK---------VDKLNKFKEDFTDADYHWD-ADF 301

  Fly   336 DDDEPQLAGEHSSIVQAPGGDTLRRNFQQIQEGRLAAEQQQQHHLMAQAQAQ 387
            .:::..::....|:..||..               .||..|:..||...::|
Yeast   302 QEEKLNISPSKFSLAAAPAA---------------WAENNQELDLMPPTESQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 102/277 (37%)
CNH 1183..1484 CDD:214481
CDC15NP_009411.2 Protein Kinases, catalytic domain 24..272 CDD:473864 102/268 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.