DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment msn and AT1G79640

DIOPT Version :9

Sequence 1:	NP_524679.3	Gene:	msn / 44030	FlyBaseID:	FBgn0010909	Length:	1504	Species:	Drosophila melanogaster
Sequence 2:	NP_001319419.1	Gene:	AT1G79640 / 844303	AraportID:	AT1G79640	Length:	684	Species:	Arabidopsis thaliana

Alignment Length:	731	Identity:	193/731 - (26%)
Similarity:	281/731 - (38%)	Gaps:	146/731 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 KDPAG--IFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVLKKYS---- 84
            |.|.|  .:.|.|.:|.|....|::.......::.|||::|...|     ..::|.:.:.:
plant     5 KYPIGPEHYTLYEFIGQGVSALVHRALCIPFDEVVAIKILDFERD-----NCDLNNISREAQTMM 64

  Fly    85 --NHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRG 147
              :|.|:...:.:|:      .|..||::|.|...||...::|:......:|..||.|.||.|:|
plant    65 LVDHPNVLKSHCSFV------SDHNLWVIMPYMSGGSCLHILKAAYPDGFEEAIIATILREALKG 123

  Fly   148 LSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQL------DRTIGRRNTFIGTPYWMAPEV 206
            |.|||.:..||||:|..|:||.....|||.||||||.|      .||   ||||:|||.||||||
plant   124 LDYLHQHGHIHRDVKAGNILLGARGAVKLGDFGVSACLFDSGDRQRT---RNTFVGTPCWMAPEV 185

  Fly   207 IACDENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRL---KSKKWSKK 268
            :.....    ||.::|:||.|||.||:|....|.....||:.|.:..:|:||.|   :.||:|:.
plant   186 MEQLHG----YDFKADIWSFGITGLELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSRS 246

  Fly   269 FHGFIDTVLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGS 333
            |...|.:.||||..:||..:.||||.|.|...:...:..:|.|.:.....|.|..:|::     .
plant   247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSSDYIARKLLDGLPDLVNRVQAIKRKE-----E 306

  Fly   334 DNDDDEPQLAGEHSSIVQAPGGDTLRR-----NFQQIQEGRLAAEQQQQHHLMAQAQAQAAAAHA 393
            |....|....||...:.|    :..:|     ||....
plant   307 DMLAQEKMADGEKEELSQ----NEYKRGISGWNFNLDD--------------------------- 340

  Fly   394 AAQAQAQLQQ------QQQQAAAAAAAAAHAAQQAQQAAQQAQAQ------QPQANRQPKPPSRQ 446
             .:|||.|.|      ....:.:|.:..|..:|..|...|:...|      ||..:|. ...:|.
plant   341 -MKAQASLIQDMDCGFSDSLSGSATSLQALDSQDTQSEIQEDTGQITNKYLQPLIHRS-LSIARD 403

  Fly   447 QVEEPGPPARPPQRLIVVPDPPHANRPLPPTPKCGEPAGQTPQQQQRNSQNNFKPSLPPRRPEPQ 511
            :.::....|.|.....|...|.|.:..|..|     ..|.|       ..||.||:.....|..|
plant   404 KSDDDSSLASPSYDSYVYSSPRHEDLSLNNT-----HVGST-------HANNGKPTDATSIPTNQ 456

  Fly   512 P-------QTAAGGQGSQQQAQPEAPPRNNRQSSGLSSSGGSASGGGGSSKPAAALPQQSNNHLG 569
            |       ...|.|.|:..:.:.:   :...|....|:..|:....||...|.....
plant   457 PTEIIAGSSVLADGNGAPNKGESD---KTQEQLQNGSNCNGTHPTVGGDDVPTEMAV-------- 510

  Fly   570 QPVNPLDPLDSSDSDSEPDEPNDRARNDGTLLASDPPKPLPGLGPVSEDANTTTPL-SHGSGGPP 633
            :|......||.||..|:|.....|.|...|....|..| :....|:.:.:::...| .|.|...|
plant   511 KPPKAASSLDESDDKSKPPVVQQRGRFKVTSENLDIEK-VVAPSPILQKSHSMQVLCQHSSASLP 574

  Fly   634 NR--PLP------------PTPDDDDQAGDRTLIMKRKL---EQNINRLQKSASTSQANVTPSRR 681
            :.  .||            |....:....|..|.|.:.|   |....|..:..|..|..|.|:.:
plant   575 HSDVTLPNLTSSYVYPLVYPVLQTNILERDNILHMMKVLTNRELTDGRAVEQGSIQQPTVPPTEK 639

  Fly   682 G-------DESNLLRD 690
            .       .|..||.|
plant   640 SMLEAAHEREKELLHD 655

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
msn	NP_524679.3	STKc_myosinIII_N_like	25..296	CDD:270785	104/286 (36%)
		S_TKc	32..296	CDD:214567	101/278 (36%)
		CNH	1183..1484	CDD:214481
AT1G79640	NP_001319419.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910