DRSC/TRiP Functional Genomics Resources

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Protein Alignment msn and AT1G70430

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_001323342.1 Gene:AT1G70430 / 843379 AraportID:AT1G70430 Length:609 Species:Arabidopsis thaliana


Alignment Length:534 Identity:138/534 - (25%)
Similarity:222/534 - (41%) Gaps:134/534 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTE--DEEEEIKLEINVLKKYSNHRNIATYYG 94
            :||.|.||.|....||:.|.....::.|:|::|:.:  ::.|.|:.|:::: ...:|.|:...:.
plant    16 YELFEEVGEGVSATVYRARCIALNEIVAVKILDLEKCRNDLETIRKEVHIM-SLIDHPNLLKAHC 79

  Fly    95 AFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSNKVIHR 159
            :||..|      .||:||.|...||...|:||...:.|::..||.:.||:|:.|.|||....|||
plant    80 SFIDSS------SLWIVMPYMSGGSCFHLMKSVYPEGLEQPIIATLLREVLKALVYLHRQGHIHR 138

  Fly   160 DIKGQNVLLTDNAEVKLVDFGVSAQL---DRTIGRRNTFIGTPYWMAPEVIACDENPDATYDNRS 221
            |:|..|:|:.....|||.||||||.:   ...:..||||:|||.||||||:...:..|..|    
plant   139 DVKAGNILIHSKGVVKLGDFGVSACMFDSGERMQTRNTFVGTPCWMAPEVMQQLDGYDFKY---- 199

  Fly   222 DLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRL---KSKKWSKKFHGFIDTVLVKDYHQ 283
                       :|....|.....||:.|.:..:|:||||   :.||:||.|...|...||||..:
plant   200 -----------LAHGHAPFSKYPPMKVLLMTLQNAPPRLDYDRDKKFSKSFRELIAACLVKDPKK 253

  Fly   284 RPYTENLLKHGFIKD-QPTD---RQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEPQLAG 344
            ||....||||.|.|. :.||   |::...|....:|.||.   ||.|...:.|.:.|.::   ..
plant   254 RPTAAKLLKHPFFKHARSTDYLSRKILHGLSPLGERFKKL---KEAEAELFKGINGDKEQ---LS 312

  Fly   345 EH-------------------SSIVQAPGGDTLRRNFQQ------IQEGRLAAEQQQQHHLMAQA 384
            :|                   :|:|..|..:......|:      :.:|:...::.|...|    
plant   313 QHEYMRGISAWNFDLEALRRQASLVIIPNEEIYNSEIQELNRNGDVPKGKPVIQRSQTMPL---- 373

  Fly   385 QAQAAAAHAAAQAQAQLQQQQQQAAAAAAAAAH-------------------AAQQAQQAAQQAQ 430
                  .:.:.:|...:.:...|...:...:.|                   |...:.:||::..
plant   374 ------EYFSEKASDMVSESSSQLTGSLLPSFHRKFLPALGYQVGIISNESNACNSSDRAAEKLA 432

  Fly   431 AQQPQ----------------ANRQPKPPS---------------------RQQVEEPGPPARPP 458
            .::|:                :::|.||.:                     .:||.:||.....|
plant   433 FEEPRQVLHPLADTKKIRKAGSDQQEKPKNGYADSPVNRESSTLSKEPLADTKQVRKPGNEQEKP 497

  Fly   459 QRLIVVPDPPHANR 472
            :...:|   .|.||
plant   498 KNGYIV---SHVNR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 97/271 (36%)
S_TKc 32..296 CDD:214567 97/271 (36%)
CNH 1183..1484 CDD:214481
AT1G70430NP_001323342.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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