DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and Stk26

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_598490.1 Gene:Stk26 / 70415 MGIID:1917665 Length:416 Species:Mus musculus


Alignment Length:442 Identity:165/442 - (37%)
Similarity:241/442 - (54%) Gaps:57/442 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAHQQQQQLAPSVNCSLDDIDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDV 65
            |||.......|.:.        ..:.||..:|..:|.:|.|::|:|:||...:|.|:.|||::|:
Mouse     1 MAHSPVAVQVPGMQ--------NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL 57

  Fly    66 --TEDEEEEIKLEINVLKKYSNHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTK 128
              .|||.|:|:.||.||.: .:...:..|||:::|.|      :||::|||.|.||..||:::  
Mouse    58 EEAEDEIEDIQQEITVLSQ-CDSSYVTKYYGSYLKGS------KLWIIMEYLGGGSALDLLRA-- 113

  Fly   129 GQSLKEEWIAYICREILRGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRN 193
             ....|..||.:.:|||:||.||||.|.||||||..||||::..:|||.||||:.||..|..:||
Mouse   114 -GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 177

  Fly   194 TFIGTPYWMAPEVIACDENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPP 258
            ||:|||:|||||||     ..:.||:::|:|||||||:|:|:.:||..|:||||.|||||:|:||
Mouse   178 TFVGTPFWMAPEVI-----QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPP 237

  Fly   259 RLKSKKWSKKFHGFIDTVLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEK 323
            .|.. .::|.|..|||..|.||...||..:.||||.||...........:|   |||.|:.|.| 
Mouse   238 TLIG-DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTEL---IDRFKRWKAE- 297

  Fly   324 EREDYRYSGSDNDDDEPQLAGEHSSIVQAPGGD----TLRR--NFQQIQEGRLAAEQQQQHHLMA 382
                   ..||.:.|......|.||....|..:    |:|:  :.:::|.|    |:|.      
Mouse   298 -------GHSDEESDSEGSDSESSSRESNPHPEWSFTTVRKKPDPKKLQNG----EEQD------ 345

  Fly   383 QAQAQAAAAHAAAQAQAQLQQQQQQAAAAAAAAAHAAQQAQQAAQQAQAQQP 434
            ..|..:..:.....|.|:|:||.:.    .|:...|.::.:::...|:...|
Mouse   346 LVQTLSCLSMIITPAFAELKQQDEN----NASRNQAIEELEKSIAVAETACP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 129/272 (47%)
S_TKc 32..296 CDD:214567 127/265 (48%)
CNH 1183..1484 CDD:214481
Stk26NP_598490.1 STKc_MST4 19..295 CDD:132971 136/294 (46%)
S_TKc 24..274 CDD:214567 127/265 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..343 12/58 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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