DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and Stk25

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_067512.3 Gene:Stk25 / 59041 MGIID:1891699 Length:426 Species:Mus musculus


Alignment Length:412 Identity:161/412 - (39%)
Similarity:237/412 - (57%) Gaps:32/412 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDV--TEDEEEEIKLEINVLKKYSNHRNI 89
            ||..:|..::.:|.|::|:||||....|.::.|||::|:  .|||.|:|:.||.||.: .:...|
Mouse    15 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYI 78

  Fly    90 ATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSN 154
            ..|:|:::|.:      :||::|||.|.||..||:|.   ..|:|.:||.|.||||:||.||||.
Mouse    79 TRYFGSYLKST------KLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE 134

  Fly   155 KVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDN 219
            :.||||||..||||::..:|||.||||:.||..|..:||||:|||:|||||||     ..:.||.
Mouse   135 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----KQSAYDF 194

  Fly   220 RSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLKSKKWSKKFHGFIDTVLVKDYHQR 284
            ::|:|||||||:|:|:.:||..||||||.|||||:|:||.|:... ||.|..|::..|.||...|
Mouse   195 KADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNNPPTLEGHH-SKPFKEFVEACLNKDPRFR 258

  Fly   285 PYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEPQLAGEHSSI 349
            |..:.||||.||...........:|   |||.|:.|.|...|:  .|..|:|.|.....||...|
Mouse   259 PTAKELLKHKFITRYTKKTSFLTEL---IDRYKRWKSEGHGEE--SSSEDSDIDGEAEDGEQGPI 318

  Fly   350 VQAPGGDTLRRN-FQQIQEG-RLAAEQQQQHHLMAQAQAQAAAAHAAAQAQAQLQQQQQQAAAAA 412
            ...|  .|:|.: ..::.:| .|.:.|:....:..|.::|..:. .......:|:::.:|:..:.
Mouse   319 WTFP--PTIRPSPHSKLHKGTALHSSQKPAEPIKRQPRSQCLST-LVRPVFGELKEKHKQSGGSV 380

  Fly   413 AAAAHAAQQAQQAAQQAQAQQP 434
            .    |.::.:.|...|:...|
Mouse   381 G----ALEELENAFSLAEESCP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 130/270 (48%)
S_TKc 32..296 CDD:214567 128/265 (48%)
CNH 1183..1484 CDD:214481
Stk25NP_067512.3 STKc_STK25 15..291 CDD:270810 137/294 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..354 17/66 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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