DRSC/TRiP Functional Genomics Resources

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Protein Alignment msn and Map4k5

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_001178945.1 Gene:Map4k5 / 503027 RGDID:1562028 Length:846 Species:Rattus norvegicus


Alignment Length:686 Identity:205/686 - (29%)
Similarity:299/686 - (43%) Gaps:198/686 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTE-DEEEEIKLEINVLKKYSNHRNI 89
            ::|...:||::.||:||||.|||.|:..||:|||:|::.:.. |:...|:.||.::|: ..|.||
  Rat    14 RNPQHDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKE-CKHCNI 77

  Fly    90 ATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSN 154
            ..|:|:::.:      ::||:.|||||.||:.|:...|  ..|.|..|||:|||.|:||:|||:.
  Rat    78 VAYFGSYLSR------EKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHTK 134

  Fly   155 KVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDN 219
            ..:||||||.|:||||:.:|||.||||:|::..||.:|.:||||||||||||.|.::|  ..|:.
  Rat   135 GKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKN--GGYNQ 197

  Fly   220 RSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNS--PPRLKSK-KWSKKFHGFIDTVLVKDY 281
            ..|:|::||||:|:.|.|||:.||||||||||:.:::  ||:||.| |||..||.|:...|.|:.
  Rat   198 LCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNP 262

  Fly   282 HQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEPQLAGEH 346
            .:||..|.||.|.|:......|.:.::|.|.::......        .||..|:||.||.....|
  Rat   263 KKRPTAERLLTHTFVGQSGLSRALAVELLDKVNNPDNHA--------HYSEGDDDDFEPHAIIRH 319

  Fly   347 SSIVQAPGGDTLRRNFQQIQEGRLAAEQQQQHHLMAQAQAQAAAAHAAAQAQAQLQQQQQQAAAA 411
                      |:|                                                    
  Rat   320 ----------TIR---------------------------------------------------- 322

  Fly   412 AAAAAHAAQQAQQAAQQAQAQQPQANRQPKPPSRQQVE---EPGPPARPPQRLIVVPDPPHANR- 472
               :.:...:|::.|.:....:.|.    :||.|::.|   |.|..:.|...|...|....||. 
  Rat   323 ---STNRNSRAERTASEINFDKLQF----EPPLRKETEARDEMGLSSEPNFILHWNPFVDGANTG 380

  Fly   473 ----------PLPPTPKCGE-PAGQTPQQQQRNSQNNFKPSLPPRRPEPQPQTAAGGQGSQQQAQ 526
                      ||||.|:... |....|.::        |.|...|.|:|:.:..   |..::|:.
  Rat   381 RSTSKRAIPPPLPPKPRINSYPEESLPDEE--------KSSTVKRCPDPETRAP---QVLRRQSS 434

  Fly   527 PEAPPRNNRQSSGLSSSGGSASGGGGSSKPAAALPQQSNNHLGQPVNPLDPLDSSDSDSEPDEPN 591
            |...|.....|.|         .|.|.||                      |.|.:::.....|.
  Rat   435 PSCVPIAETSSVG---------NGNGISK----------------------LISENTEGSAQAPQ 468

  Fly   592 DRARNDGTLLASDPPKP-LPGLGPVSE----------------DANTTTPLSHGSGGPPNRPLPP 639
            ...:.|    ..|.||| :.||.|..:                ..|..|...|            
  Rat   469 LPRKKD----KRDFPKPTINGLPPTPKVLMGACFSKVFDGCPLKINCATSWIH------------ 517

  Fly   640 TPDDDDQ-------AGDRTLIMKRKLEQNINRLQKS 668
             ||..||       .|..||        |:|.|.::
  Rat   518 -PDTKDQYIIFGTEDGIYTL--------NLNELHEA 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 131/273 (48%)
S_TKc 32..296 CDD:214567 130/267 (49%)
CNH 1183..1484 CDD:214481
Map4k5NP_001178945.1 STKc_MAP4K5 10..277 CDD:270813 131/273 (48%)
S_TKc 20..277 CDD:214567 130/267 (49%)
CNH 511..826 CDD:214481 12/55 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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