DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and map4k5

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_021336201.1 Gene:map4k5 / 334565 ZFINID:ZDB-GENE-030131-6497 Length:894 Species:Danio rerio


Alignment Length:642 Identity:204/642 - (31%)
Similarity:300/642 - (46%) Gaps:143/642 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTE-DEEEEIKLEINVLKKYSNHRNI 89
            ::|...||||:.||:||||.|||.|...||:|||:|::.:.. |:...|:.||.::|:.::| ||
Zfish    14 RNPQHDFELIQRVGSGTYGDVYKARKISTGELAAVKIIKLEPGDDFSIIQQEIFMVKECTHH-NI 77

  Fly    90 ATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSN 154
            ..|:|:::.:      ::||:.|||||.||:.|:...|  ..|.|..|||:|||.|:||.||||.
Zfish    78 VAYFGSYLCR------EKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLGYLHSK 134

  Fly   155 KVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDN 219
            ..:||||||.|:|||||.:|||.||||:|::..|:.:|.:||||||||||||.|.::|  ..|::
Zfish   135 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATMAKRKSFIGTPYWMAPEVAAVEKN--GGYNH 197

  Fly   220 RSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNS--PPRLKSK-KWSKKFHGFIDTVLVKDY 281
            ..|:|::|||::|:||.|||:.||||||||||:.:::  ||:||.| |||..||.|:...|.|:.
Zfish   198 LCDIWAVGITSIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSTAFHNFVKLSLTKNP 262

  Fly   282 HQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEPQLAGEH 346
            .:||..|.:|.|.|:......|::.::|.|       :....:.....:|..|.||.|| ||..|
Zfish   263 KRRPTAEKMLSHLFVGQTGLTRRLALELLD-------KMNNPDNHQSHFSQGDEDDFEP-LAERH 319

  Fly   347 SSIVQAPGGDTLRRNFQQIQEGRLAAEQQQQHHLMAQAQAQAAAAHAAAQAQAQLQQQQQQAAAA 411
                      |:|                ..|...|:|:          :.|:|:...:.|.   
Zfish   320 ----------TIR----------------STHSRSARAE----------RTQSQINFDKLQF--- 345

  Fly   412 AAAAAHAAQQAQQAAQQAQAQQPQANRQPKPPSRQQVEEPGPPARPPQRLIVVPDPPHANRPLPP 476
                                         :||.|::.|...       .:.|..|   .:.|.|.
Zfish   346 -----------------------------EPPLRKETEASA-------EMDVTKD---NDFPSPW 371

  Fly   477 TPKCGEPAGQTPQQQQRNSQNNFKPSLPPRRPE-PQPQTAAGGQGSQQQAQPEAPPR-NNRQSSG 539
            :|....|.......:....:...:..|.|.... .....:..|:|    ..|..||: :..:||.
Zfish   372 SPFTDGPITSRSLLKSVEEELFIRGHLAPLEDAFEDVDLSTLGKG----VPPPLPPKPSQARSSS 432

  Fly   540 LSSSGGSASG-------GGGSSKPAAALPQQSNNHLGQ----------PVNPLDP-LDSSDSDSE 586
            :|...|.|.|       .|..:.|.....:||....|.          .|:...| |.|..:|.|
Zfish   433 VSDEFGLADGCQTVRRFPGSDNGPMPVARRQSTPERGSNAEHTHSDYLSVSVSSPGLLSHTTDHE 497

  Fly   587 PDEPNDRARNDGTLLASDPPKPLPGLGPVSE--DANTTTPLSHGSGGPPNRPLPPTP 641
            .|       :||: :..|..|..||.....|  |...:.|..:|        |||||
Zfish   498 ED-------SDGS-VNGDVSKSPPGRPQRKERKDFPVSKPAING--------LPPTP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 133/273 (49%)
S_TKc 32..296 CDD:214567 132/267 (49%)
CNH 1183..1484 CDD:214481
map4k5XP_021336201.1 STKc_MAP4K5 10..277 CDD:270813 133/273 (49%)
CNH 559..874 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.