DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and tnika

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_005163444.1 Gene:tnika / 325042 ZFINID:ZDB-GENE-030131-3767 Length:1419 Species:Danio rerio


Alignment Length:1662 Identity:689/1662 - (41%)
Similarity:874/1662 - (52%) Gaps:424/1662 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLDDIDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVL 80
            |||:|||:.|:||||||||:|:||||||||||||||.|||||||||.||||.:||||||.|||:|
Zfish     9 SLDEIDLSTLRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKCMDVTGEEEEEIKAEINML 73

  Fly    81 KKYSNHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREIL 145
            ||||:||||||||||||||:|||.|||||||||:|||||||||:|:|||.||||:|.|||.||||
Zfish    74 KKYSHHRNIATYYGAFIKKNPPGVDDQLWLVMEFCGAGSVTDLIKNTKGNSLKEDWTAYISREIL 138

  Fly   146 RGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACD 210
            |||::||.:|||||||||||||||:||||||||||||||||||:.||||||||||||||||||||
Zfish   139 RGLTHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVSRRNTFIGTPYWMAPEVIACD 203

  Fly   211 ENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLKSKKWSKKFHGFIDT 275
            ||||||||.:|||||||||||||||..||||:|||||||||||||:|||||||||:|:||.||::
Zfish   204 ENPDATYDYKSDLWSLGITALEMAEGAPPLCELHPMRALFLIPRNAPPRLKSKKWTKRFHSFIES 268

  Fly   276 VLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEP 340
            .|||:::.||.|:.||||.||:|...:|.:||||||||||.:|::.|::..:|.||||:.:::..
Zfish   269 CLVKNHNMRPGTDQLLKHPFIRDMANERTIRIQLKDHIDRTRKKRGERDETEYEYSGSEEEEEAM 333

  Fly   341 QLAGEHSSIVQAPGGDTLRRNFQQIQEG---------RLAAEQQQ----QHHLMAQAQ------- 385
            ...||.|||:..||..||||:|.::|..         |...||||    :|.|:|:.|       
Zfish   334 LEIGEPSSIINIPGESTLRRDFLRLQVANKERSDALRRQQLEQQQNEGHKHQLLAERQKRIEEQK 398

  Fly   386 -------AQAAAAHAAAQAQAQ------------------------------------LQQQ--Q 405
                   .|......|.:.|.|                                    ||||  |
Zfish   399 EQRRRLEEQQRREREARKQQEQRHRYEELRREEERRQAEREQEYIRRQLEEEQRQLEILQQQLLQ 463

  Fly   406 QQAAAAAAAAAHAAQQAQQAAQQAQAQQPQA---NRQPKPPSRQQVEEP-------------GPP 454
            :||...........:|.|....|.|.||.:|   :.|.:...:||...|             .|.
Zfish   464 EQALLLEYKRKQVEEQRQADRLQRQLQQERAYLVSLQQQQQQQQQDSRPEEKKQLYHYKDAVNPS 528

  Fly   455 ARP--------PQRLIVVPDPPHANRPL-PPTPKCGEPAGQT---------------PQQQQRNS 495
            .:|        |.::.:.|.....:.|| ......|.|.|:.               ||:|....
Zfish   529 DKPAWAKKIHGPPQIKIQPSNRKQSTPLYYKLDNLGIPIGRAILNPSINQSVMQPLKPQKQNLIQ 593

  Fly   496 QNNFKP---------SLPPR----RP-----------EPQPQTAAGGQGSQQQAQPEAPPRNNRQ 536
            :.:..|         |:.||    ||           ..|...|...:.:.:.:.|..|||:...
Zfish   594 RQSISPPPQYSAKKISMGPRPGFSRPPYKRVEERSKLNRQSSPALQHKVANRISDPSLPPRSESF 658

  Fly   537 SSGLSSSGGSASGGGGSSKPAAALPQQSNNHLGQPVNP----LDPLDSSDS-------------- 583
            ||             |..:||...|      :.:||.|    |.|:.|..|              
Zfish   659 SS-------------GGMQPARTPP------MHRPVEPQMAHLVPVRSHSSSMSVSQSLHDQSAK 704

  Fly   584 ----------DSEPDEPNDRARNDGTLLASDPPKPLPGLGPVSEDANTTTPLSHGSGGPPNRPLP 638
                      .:.|:.|  |..:|.|   |:.|.|.|.:....|..:.::|.......||     
Zfish   705 GVSAFQESLVSNRPEMP--RQNSDPT---SEMPPPAPRMASHEEKPDRSSPWLREDAVPP----- 759

  Fly   639 PTPDDDDQAGDRTLIMKRKLEQNINRLQKSASTSQANVTPSRRGDESNLLRDWDFDRFFPKNANG 703
                              ||.......|::.|.|.|            |.|         ||:.|
Zfish   760 ------------------KLSGTTQVPQRTTSISPA------------LAR---------KNSPG 785

  Fly   704 PRGSGRGSPTTTASLSRSS----QLSTLKVDTKLQRASVAEAITRPVPRGYQPLKAEPSASQSIA 764
             .|...|...:.:.|.|:|    :.:.|.:|..|||.|                 :..|:|.|..
Zfish   786 -NGESSGGGRSASQLIRTSNPDLRRTELSLDVALQRTS-----------------SNSSSSSSTP 832

  Fly   765 KEQGSASGSGSGSGSASGS---GSGGSTNSPAHKRQDSDSRLPTNFERGFRRENSDFFPLAKRYS 826
            ..||     ||..||:..:   |||.|..||...::.|........|.......:|...|||...
Zfish   833 SSQG-----GSQPGSSERNQPRGSGKSEGSPVALQETSKPIQEEGRELSKPSRPADLTALAKELR 892

  Fly   827 AVFSGASASGSTAGSPSAQALQRSSAVYQRNSIYSSSISSKSKENDVPGAPGAAAAGTATASAKP 891
            .:                 .:...|....:.:.||||........|..|..|  ..||.:.|..|
Zfish   893 EL-----------------RIDEVSRPPLKLTDYSSSSEDSDSSEDEDGTVG--HDGTVSVSDIP 938

  Fly   892 GPAAATTTATKGAAPKTSKSLANFHFLRPRREKTESVIVLQNAAVRAQRLQQLQQQQQQQQLQQQ 956
                ....:.:|    .::|..:.|        .:|:....|.          :.:....::::.
Zfish   939 ----RIMPSVQG----NNESFTSSH--------DDSLTDSYND----------ESKDGTLRMREN 977

  Fly   957 QQQQNRGGGGGGGGGGGGGGSSGVGADGTGLGTPGTRTSSVLPDLLSQA-SPATPP----RHDKS 1016
            .::|..|.|...|..|.|.                      |||||.|: ||:..|    ..|..
Zfish   978 NERQRLGHGESNGFAGHGN----------------------LPDLLQQSHSPSGTPTGLNSQDLD 1020

  Fly  1017 SSEEYQAAISSSVHSTPSKSFIASSGSGGLGLGGGTVVGGVIISSNHSPQSTISLASSSSNSRQN 1081
            |.:|:                         |||||                              
Zfish  1021 SMDEF-------------------------GLGGG------------------------------ 1030

  Fly  1082 SPKNSISKTRSSSSITNLLHKSASSSSANLHHLTPC----SSTSSASISNPLPPHAYALQQKQRS 1142
                      |.:|.|..:       ...::..:|.    .|:::|..:|.|      |:|:|..
Zfish  1031 ----------SKASFTPFV-------DPRVYQTSPTDDNDESSAAAMFANEL------LRQEQAK 1072

  Fly  1143 FLTFGFGAGGSGPSRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTEN 1207
            .          ..:|:.|.||||  ||:....:|||||||||||||||||||||||||||:||||
Zfish  1073 L----------NEARKISVVNVN--PTNIRPHSDTPEIRKYKKRFNSEILCAALWGVNLLVGTEN 1125

  Fly  1208 GLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQ 1272
            ||||||||||||||.||:|||||||:||||.|:|||||||||::||||||||:::||..|   .:
Zfish  1126 GLMLLDRSGQGKVYNLITRRRFQQMDVLEGLNVLVTISGKKNKLRVYYLSWLRNRILHND---PE 1187

  Fly  1273 VERRNGWINVGDLQGAVHFKIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKNFGELEHRPL 1337
            ||::.|||.||:|:|.:|:|:||||||||||||||:|:|||||||||||||||||:|.||:|||.
Zfish  1188 VEKKQGWITVGELEGCIHYKVVKYERIKFLVIALKNSVEIYAWAPKPYHKFMAFKSFTELQHRPQ 1252

  Fly  1338 LVDLTIEDQSRLKVIYGSAEGFHAVDLDSAEVYDIYLPKHTQGAIIPHCIVALPNSNGMQLLLCY 1402
            |||||:|:..||||||||:.|||.:|:||...||||:|.|.|..:.||.||.||.::||::||||
Zfish  1253 LVDLTVEEGQRLKVIYGSSVGFHVIDVDSGSPYDIYIPSHIQSTVTPHAIVVLPKTDGMEMLLCY 1317

  Fly  1403 DNEGVYVNTVGRVSKNIVLQWGEMPTSVAYIGTGQIMGWGNKAIEIRSVESGHLDGVFMHKKAQR 1467
            ::|||||||.||::|::||||||||||||||.:.||||||.|||||||||:||||||||||:|||
Zfish  1318 EDEGVYVNTYGRITKDVVLQWGEMPTSVAYIHSNQIMGWGEKAIEIRSVETGHLDGVFMHKRAQR 1382

  Fly  1468 LKFLCERNDKVFFSSAKGASSCQIYFMTLNKPGMANW 1504
            |||||||||||||:|.:...|.|::|||||:..:.||
Zfish  1383 LKFLCERNDKVFFASVRSGGSSQVFFMTLNRNSLMNW 1419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 224/270 (83%)
S_TKc 32..296 CDD:214567 218/263 (83%)
CNH 1183..1484 CDD:214481 226/300 (75%)
tnikaXP_005163444.1 PKc_like 18..313 CDD:304357 239/294 (81%)
S_TKc 25..289 CDD:214567 218/263 (83%)
CNH 1101..1399 CDD:214481 226/300 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596709
Domainoid 1 1.000 480 1.000 Domainoid score I398
eggNOG 1 0.900 - - E1_KOG0587
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1141 1.000 Inparanoid score I208
OMA 1 1.010 - - QHG46069
OrthoDB 1 1.010 - - D246443at33208
OrthoFinder 1 1.000 - - FOG0001422
OrthoInspector 1 1.000 - - otm24730
orthoMCL 1 0.900 - - OOG6_101812
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X885
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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