DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and mig-15

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:NP_001024973.1 Gene:mig-15 / 181248 WormBaseID:WBGene00003247 Length:1096 Species:Caenorhabditis elegans


Alignment Length:1531 Identity:655/1531 - (42%)
Similarity:803/1531 - (52%) Gaps:483/1531 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LDDIDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVLK 81
            ||:|||.:|:|||||||||||||||||||||||||.||.||||||:|::.||||:|||||||:||
 Worm     6 LDEIDLNSLRDPAGIFELIEVVGNGTYGQVYKGRHVKTAQLAAIKIMNINEDEEDEIKLEINMLK 70

  Fly    82 KYSNHRNIATYYGAFIKKSP--PGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREI 144
            |:|:|||:||||||||||.|  .||.||||||||:||:||:|||||:|||.||||||||||||||
 Worm    71 KHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEFCGSGSITDLVKNTKGGSLKEEWIAYICREI 135

  Fly   145 LRGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIAC 209
            ||||.:||.:||||||||||||||||:|||||||||||||||:|:||||||||||||||||||||
 Worm   136 LRGLYHLHQSKVIHRDIKGQNVLLTDSAEVKLVDFGVSAQLDKTVGRRNTFIGTPYWMAPEVIAC 200

  Fly   210 DENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLK-SKKWSKKFHGFI 273
            ||:|:||||:||||||||||||||||..|||||:||||||||||||.||:|| :|||:|||..||
 Worm   201 DESPEATYDSRSDLWSLGITALEMAEGHPPLCDMHPMRALFLIPRNPPPKLKRNKKWTKKFETFI 265

  Fly   274 DTVLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDD 338
            :|||||||||||||..||:|.|||:||.::.:|..:|:||||  .|:.:|:..||.||||::|:.
 Worm   266 ETVLVKDYHQRPYTGALLRHPFIKEQPHEQTIRHSIKEHIDR--NRRVKKDDADYEYSGSEDDEP 328

  Fly   339 EPQLAG---------EHSSIVQAPGGDTLRRNFQQIQEGRLAAEQQQQHHLMAQAQAQAAAAHAA 394
            .|...|         |.||::  |..:|||:.||::||....         .|:..||.......
 Worm   329 SPNNRGPSMGIRDDSESSSMI--PMDNTLRKGFQKLQESSRG---------FAEPGAQQLRRLPQ 382

  Fly   395 AQAQAQLQQQQQQAAAAAAAAAHAAQQAQQAAQQAQAQQPQANRQPKPPSRQQVEEPGPPARPPQ 459
            ..|.|..|.||.:.......::....:|..:...|...:.....:|:|.|..|        |.||
 Worm   383 QPAPAPFQYQQSRYVEPRRESSEVKLRAVSSRGAADGPRHSPASRPRPVSHHQ--------RSPQ 439

  Fly   460 RLIVVPDPPH----ANRPLPPTPKCGEPAGQTPQQQQRNSQNNFKPSLPPRRPE---PQPQTAAG 517
            :  ..|..||    ||.         |...::.::::|..:.....::|..|..   |.||.   
 Worm   440 Q--SHPAAPHLADLANY---------EKRRRSEREERRERERQAHHAMPIARVSASVPAPQQ--- 490

  Fly   518 GQGSQQQAQP-----EAPPRNNRQSSGLSSSGGSASGGGG----SSKPAAALPQQSNNHLGQPVN 573
               |::.::|     ..|...:..:|.||..||..:|...    |..|.|..|::::  :....:
 Worm   491 ---SRKMSEPLLITHVKPEDLDVLASELSKMGGHHNGRSREESMSPPPPAPPPREAS--ISSITD 550

  Fly   574 PLD--PLDSSDSDSEPDEPNDRARN-DGTLLASDPPKPLPGLGPVSEDANTTTPLSHGSGGPPNR 635
            .:|  .||:. :|:|.|:..|...| :|||..                              ||:
 Worm   551 TIDVGELDNG-ADAEWDDLKDIMMNGEGTLRG------------------------------PNK 584

  Fly   636 PLPPTPDDDDQAGDRTLIMKRKLEQNINRLQKSASTSQANVTPSRRGDESNLLRDWDFDRFFPKN 700
            ||||||.|    |:.||:                               |::.|          |
 Worm   585 PLPPTPTD----GENTLV-------------------------------SDVRR----------N 604

  Fly   701 ANGPRGSGRGSPTTTASLSRSSQLSTLKVDTKLQRASVAEAITRPVPRGYQPLKAEPSASQSIAK 765
            .||..|.|                                        .|:..|. |.....|..
 Worm   605 GNGNSGHG----------------------------------------AYKGKKI-PEIRPGIIS 628

  Fly   766 EQGSASGSGSGSGSASGSGSGGSTNSPAHKRQDSDSRLPTNFERGFRRENSDFFPLAKRYSAVFS 830
            .....|.|.:..|           |.|                                  .:|.
 Worm   629 LDDDDSDSDNEEG-----------NEP----------------------------------LMFK 648

  Fly   831 GASASGSTAGSPSAQALQRSSAVYQRNSIYSSSISSKSKENDVPGAPGAAAAGTATASAKPGPAA 895
            ..:||.|                                                          
 Worm   649 PINASSS---------------------------------------------------------- 655

  Fly   896 ATTTATKGAAPKTSKSLANFHFLRPRREKTESVIVLQNAAVRAQRLQQLQQQQQQQQLQQQQQQQ 960
                  :||.|.          |.|:                        ..|.::|:..|.:|.
 Worm   656 ------RGALPD----------LLPK------------------------SPQLRRQINDQTRQM 680

  Fly   961 NRGGGGGGGGGGGGGGSSGVGADGTGLGTPGTRTSSVLPDLLSQASPATPPRHDKSSSEEYQAAI 1025
                                                            :..|.|:|:|       
 Worm   681 ------------------------------------------------SDDRADESAS------- 690

  Fly  1026 SSSVHSTPSKSFIASSGSGGLGLGGGTVVGGVIISSNHSPQSTISLASSSSNSRQNSPKNSISKT 1090
                                            :..|.:.|           |..|||.       
 Worm   691 --------------------------------LFGSFYQP-----------NGFQNSD------- 705

  Fly  1091 RSSSSITNLLHKSASSSSANLHHLTPCSSTSSASISNPLPPHAYALQQKQRSFL-TFGFGAGGSG 1154
             |.|||                                  .|:::.:.:::||: .||.|||..|
 Worm   706 -SRSSI----------------------------------QHSFSNRDREKSFVGYFGGGAGAGG 735

  Fly  1155 -----PSRRE--SHVNVNVTPTSH--EAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLM 1210
                 |.|.:  :.|.|||||.|:  .|.||.||||||||:|:.||||||||||||||||::|||
 Worm   736 GTVNRPGRPQDINQVQVNVTPNSNGTPAENDAPEIRKYKKKFSGEILCAALWGVNLLIGTDSGLM 800

  Fly  1211 LLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGL--SDQV 1273
            |||||||||||.|||||||.||.||||||||.||||:|.|:||||||||:.|||||:|.  ::..
 Worm   801 LLDRSGQGKVYPLISRRRFDQMTVLEGQNILATISGRKRRIRVYYLSWLRQKILRTEGAGSANTT 865

  Fly  1274 ERRNGWINVGDLQGAVHFKIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKNFGELEHRPLL 1338
            |:||||:||||||||:|||||:||||||||:.|:.||||||||||||||||:||:||.|.|.||:
 Worm   866 EKRNGWVNVGDLQGAIHFKIVRYERIKFLVVGLESSIEIYAWAPKPYHKFMSFKSFGSLSHVPLI 930

  Fly  1339 VDLTIEDQSRLKVIYGSAEGFHAVDLDSAEVYDIYLPKHTQGAIIPHCIVALPNSNGMQLLLCYD 1403
            ||||:||.:||||:|||..||||:|||||.|||||.|..:.....|||||.||||||||||||||
 Worm   931 VDLTVEDNARLKVLYGSTGGFHAIDLDSAAVYDIYTPAQSGQTTTPHCIVVLPNSNGMQLLLCYD 995

  Fly  1404 NEGVYVNTVGRVSKNIVLQWGEMPTSVAYIGTGQIMGWGNKAIEIRSVESGHLDGVFMHKKAQRL 1468
            ||||||||.||::||:||||||||:|||||.|||||||||||||||||::|||||||||||||:|
 Worm   996 NEGVYVNTYGRMTKNVVLQWGEMPSSVAYISTGQIMGWGNKAIEIRSVDTGHLDGVFMHKKAQKL 1060

  Fly  1469 KFLCERNDKVFFSSAKGASSCQIYFMTLNKPGMANW 1504
            |||||||||||||||||..|||||||||||||:.||
 Worm  1061 KFLCERNDKVFFSSAKGGGSCQIYFMTLNKPGLTNW 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 226/273 (83%)
S_TKc 32..296 CDD:214567 220/266 (83%)
CNH 1183..1484 CDD:214481 239/302 (79%)
mig-15NP_001024973.1 STKc_myosinIII_N_like 14..288 CDD:270785 226/273 (83%)
S_TKc 21..288 CDD:214567 220/266 (83%)
CNH 773..1076 CDD:214481 239/302 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167788
Domainoid 1 1.000 476 1.000 Domainoid score I207
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46069
OrthoDB 1 1.010 - - D246443at33208
OrthoFinder 1 1.000 - - FOG0001422
OrthoInspector 1 1.000 - - oto20416
orthoMCL 1 0.900 - - OOG6_101812
Panther 1 1.100 - - LDO PTHR48015
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6825
SonicParanoid 1 1.000 - - X885
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.890

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