DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and Map4k3

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_038967654.1 Gene:Map4k3 / 170920 RGDID:621280 Length:946 Species:Rattus norvegicus


Alignment Length:660 Identity:212/660 - (32%)
Similarity:304/660 - (46%) Gaps:151/660 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVLKKYSNHRNIA 90
            ::|...||||:.:|:||||.|||.|:..||:||||||:.:...|:..:..:..::.|...|.||.
  Rat    10 RNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHANIV 74

  Fly    91 TYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREILRGLSYLHSNK 155
            .|:|:::::      |:||:.||:||.||:.|:...|  ..|.|..|||:.||.|:||.||||..
  Rat    75 AYFGSYLRR------DKLWICMEFCGGGSLQDIYHVT--GPLSELQIAYVSRETLQGLYYLHSKG 131

  Fly   156 VIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDNR 220
            .:||||||.|:|||||..|||.|||||||:..||.:|.:||||||||||||.|.:..  ..|:..
  Rat   132 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERK--GGYNQL 194

  Fly   221 SDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNS--PPRLKSK-KWSKKFHGFIDTVLVKDYH 282
            .|||::||||:|:||.|||:.||||||||||:.:::  ||:||.| |||..||.|:...|.|:..
  Rat   195 CDLWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKLKWSNSFHHFVKMALTKNPK 259

  Fly   283 QRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDEPQLAGEHS 347
            :||..|.||:|.|: .||..|.:.|:|.|.::         ..:...|...|:||.||.:|..| 
  Rat   260 KRPTAEKLLQHPFV-TQPLTRSLAIELLDKVN---------NPDHSTYHDFDDDDPEPLVAVPH- 313

  Fly   348 SIVQAPGGDTLRR----------NFQQIQEGRLAAEQQQQHHLMAQAQA---QAAAAHAAAQAQA 399
               :.|  .|.|.          ||.|::......::.:.||.:..:..   .:...:..|::..
  Rat   314 ---RIP--STSRNVREEKTRSEINFGQVKFDPPLRKETEPHHELPDSDGFFDSSEEMYYTARSNL 373

  Fly   400 QLQQQQQQA------------------AAAAAAAAHAAQQAQQAAQQAQAQQPQANRQPKPPSRQ 446
            .||.:..|.                  :.|.:......::..|....|..:..:.:......|..
  Rat   374 DLQLEYGQGHQSNYFLGGNKNCILYNESLARSLLKSVEEELHQRGHVAHLEDDEGDDDDSKHSTL 438

  Fly   447 QVEEPGPPARPPQRLIVVPDPPHANR-----PLPPTPKCGEPAGQTPQQQQRNSQNNFKPS-LPP 505
            :.:.| ||..|..:.|.:|...|::.     .:...|..|.||               ||| :||
  Rat   439 KAKVP-PPLPPKPKSISIPQDTHSSEDSNQGTIKRCPSSGSPA---------------KPSHVPP 487

  Fly   506 RRPEPQ--PQTAA--GGQGSQQQAQPEAPPRNNRQSSGLSSSGGSASGGGGSSKPAAALPQQSNN 566
            |.|.|:  ||..|  |..|.|.|               ||...|.:|......:..:...|||..
  Rat   488 RPPPPRLPPQKPAVLGEGGGQIQ---------------LSQGNGVSSFQLNGERDGSVHQQQSEQ 537

  Fly   567 HLGQPVNPLDPLDSSDSDSEPDEPNDRARNDGTLLASDPPKPLPGLGPVSEDANTTTPLSHGSGG 631
            .                              ||.|:....|.:|            .|:|:|   
  Rat   538 R------------------------------GTNLSRKEKKDVP------------KPISNG--- 557

  Fly   632 PPNRPLPPTP 641
                 |||||
  Rat   558 -----LPPTP 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 135/272 (50%)
S_TKc 32..296 CDD:214567 134/266 (50%)
CNH 1183..1484 CDD:214481
Map4k3XP_038967654.1 STKc_MAP4K3_like 15..273 CDD:270788 134/267 (50%)
CNH 583..926 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.