DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment msn and map4k4

DIOPT Version :9

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_002934552.1 Gene:map4k4 / 100491719 XenbaseID:XB-GENE-1011650 Length:1403 Species:Xenopus tropicalis


Alignment Length:1629 Identity:703/1629 - (43%)
Similarity:902/1629 - (55%) Gaps:374/1629 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLDDIDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVL 80
            ||.||||::|:||||||||:||||||||||||||||.||||||||||||||||||||||||||:|
 Frog     9 SLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINML 73

  Fly    81 KKYSNHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWIAYICREIL 145
            ||||:||||||||||||||||||.|||||||||:|||||:|||||:|||.||||:|||||.||||
 Frog    74 KKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNSLKEDWIAYISREIL 138

  Fly   146 RGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACD 210
            |||::||::.||||||||||||||:||||||||||||||||||:|||||||||||||||||||||
 Frog   139 RGLAHLHAHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 203

  Fly   211 ENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLKSKKWSKKFHGFIDT 275
            ||||||||.||||||.||||:||||..|||||:||||||||||||.|||||||||||||..||:.
 Frog   204 ENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEG 268

  Fly   276 VLVKDYHQRPYTENLLKHGFIKDQPTDRQVRIQLKDHIDRCKKRKQEKEREDYRYSGSDNDDDE- 339
            .|||:|.|||.||.||||.||:|||.:|||||||||||||.:|::.||:..:|.||||:.:::| 
 Frog   269 CLVKNYMQRPPTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEV 333

  Fly   340 PQLAGEHSSIVQAPGGDTLRRNF-----------------QQIQEGRLAAEQQQQHHLMAQAQAQ 387
            |:..||.||||..||..||||:|                 |.:||.:|..:::.:..|:|:.|.:
 Frog   334 PEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKR 398

  Fly   388 AAAAHAAAQAQAQLQQQQQQAAAAAAAAAHAAQQAQQAAQQAQAQQPQANRQPKPPSRQQVEEPG 452
               .....:.:.:|::||::...|         :.||..:|.:.:|.:..|..:...|::.||..
 Frog   399 ---IEQQKEQRRRLEEQQRREREA---------RRQQEREQRRREQEEKKRMEEMERRRKEEEER 451

  Fly   453 PPARPPQRLIVVPDPPHANRPLPPTPKCGEPAGQTPQQQQ------------------------- 492
            ..|...:|. |..:..:..|.|....:..|...|...|:|                         
 Frog   452 RRAEEEKRR-VEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLEYRWREMEEHRQAERLQRQLQ 515

  Fly   493 ------RNSQNNFKPSLPPRRPEPQPQTAAGGQGSQ-------QQAQP---------EAPPRNNR 535
                  .:.|::.:...||:: :||||.....|..:       |:.:|         ||..|..:
 Frog   516 QEQAYLMSLQHDHRQQQPPQQ-QPQPQQPPLSQQERSKQTYHTQEPKPHYEQAERIREAEERLRK 579

  Fly   536 QSSGLSSS--------------GGSASGGGGSSKPAAAL------PQQSNNHLGQPVNPLDPLDS 580
            .:.|...:              ..|.|...|:|:||...      ||...:||....|.:.|:..
 Frog   580 ANQGSPEAQAKQPGRVLEPLVPSRSESFSNGNSEPAQPAMHRPVEPQVQWSHLASLKNNVSPVSR 644

  Fly   581 SDSDSEP-----------DEPNDRARNDGTLLASDPPKPLPGLGPVSEDANTTTPLSHGSGGPPN 634
            |.|.|:|           .:.:..:|::.....|||.      ..:||........|.....||.
 Frog   645 SHSFSDPSPKFAPHLLRSQDSHQTSRSEVQSQGSDPK------SEISEPTQRVWARSDSDEVPPR 703

  Fly   635 RPLPPTPDDDDQAGDRTLIMKRKLEQNINRLQKSASTSQANVTPSRRGDESNLLRDWDFDRFFPK 699
            .|:..|        .|:.::.||                          :|.|            
 Frog   704 VPVRTT--------SRSPVLSRK--------------------------DSPL------------ 722

  Fly   700 NANGPRGSGRGSPTTTASLSRSSQLSTLKVDTKLQRASVAEAITRPVPRGYQPLKAEPSASQSIA 764
                   .|.|...|.|    ..:.||..::.:|....|.:.:.||           .|.|.|.:
 Frog   723 -------QGSGQQNTQA----GQRNSTSNIEPRLLWERVEKLVPRP-----------GSGSSSGS 765

  Fly   765 KEQGSASGSGSGSGSASGS-----GSGGSTNSPAHKRQDSDSRLPTNFERGFRRENS----DFFP 820
            ...||.:||..||.|.||.     .|..|..||: :|.::.::.....:...|:..:    |...
 Frog   766 SNSGSQAGSHPGSQSGSGERFRMRSSSKSEGSPS-QRHENTAKKSEEKKEAVRQAKAPGEVDLTA 829

  Fly   821 LAKRYSAV-----------FSGAS-----------------ASGSTAGSPSAQALQRSSAVYQRN 857
            |||...||           :|.:|                 |..||:|...|:|:   |::...|
 Frog   830 LAKELRAVDDVRPLHKVTDYSSSSEESGTTDEEDDDMEQEGADESTSGPEDARAM---SSLNLSN 891

  Fly   858 SIYSSSISSKSKENDVPGAPGAAAAGTATASAKPGPAAATTTATKGAAPKTSKSLANFHFLRPRR 922
            . .:.|:.:....:||...|.                                       :.|.:
 Frog   892 G-ETESVKTMIVHDDVESEPA---------------------------------------MTPSK 916

  Fly   923 EKTESVIVLQNAAVRAQRLQQLQQQQQQQQLQQQQQQQNRGGGGGGGGGGGGGGSSGVGADGTGL 987
            |.|   ::::.:.|..:|..||:                           ..|.:|.:       
 Frog   917 EGT---LIVRQSTVDKKRANQLE---------------------------SNGFASRI------- 944

  Fly   988 GTPGTRTSSVLPDLLSQASPATPPRHDKSSSEEYQAAISSSVHSTPSKSFIASSGSGGLGLGGGT 1052
                    .:|||||.|:       |..|::       ||...|.|:.:.               
 Frog   945 --------HLLPDLLQQS-------HSSSTT-------SSPTSSQPTPTM--------------- 972

  Fly  1053 VVGGVIISSNHSPQSTISLASSSSNSRQNSPKNSISKTRSSSSITNLLHKSASSSSANLHHLTPC 1117
                    |..:||..:     ::|..| |..|::.|.:||||.|..:       ...|..::|.
 Frog   973 --------SPQTPQDKL-----TANETQ-SASNTLQKHKSSSSFTPFI-------DPRLLQISPS 1016

  Fly  1118 SSTSSASISNPLPPHAYALQQKQRSFLTFGFG-------AGGSGPSRRESHVNVNVTPTSHEAAN 1175
            |.|:..|:...:  .......|..:|:..||.       |....|:|:.|.||||  ||:....:
 Frog  1017 SGTTVTSVGTYM--RTLEANLKNTNFILVGFSSEALRPDAMRQDPTRKGSVVNVN--PTNTRPQS 1077

  Fly  1176 DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNI 1240
            |||||||||||||||||||||||||||:|||:||||||||||||||.||:|||||||:||||.|:
 Frog  1078 DTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLINRRRFQQMDVLEGLNV 1142

  Fly  1241 LVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVERRNGWINVGDLQGAVHFKIVKYERIKFLVIA 1305
            |||||||||::||||||||::|||..|   .:||::.||..||||:|.||:|:||||||||||||
 Frog  1143 LVTISGKKNKLRVYYLSWLRNKILHND---PEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIA 1204

  Fly  1306 LKDSIEIYAWAPKPYHKFMAFKNFGELEHRPLLVDLTIEDQSRLKVIYGSAEGFHAVDLDSAEVY 1370
            ||.|:|:|||||||||||||||:||:|.|||||||||:|:..||||||||..||||||:||..||
 Frog  1205 LKSSVEVYAWAPKPYHKFMAFKSFGDLVHRPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGAVY 1269

  Fly  1371 DIYLPKHTQGAIIPHCIVALPNSNGMQLLLCYDNEGVYVNTVGRVSKNIVLQWGEMPTSVAYIGT 1435
            |||||.|.|.:|.||.|:.|||::||:||:||::|||||||.||::|::||||||||||||||.:
 Frog  1270 DIYLPTHIQSSIQPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRS 1334

  Fly  1436 GQIMGWGNKAIEIRSVESGHLDGVFMHKKAQRLKFLCERNDKVFFSSAKGASSCQIYFMTLNKPG 1500
            .||||||.|||||||||:||||||||||:||||||||||||||||:|.:...|.|:|||||.:..
 Frog  1335 NQIMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRSS 1399

  Fly  1501 MANW 1504
            :.:|
 Frog  1400 LLSW 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 234/270 (87%)
S_TKc 32..296 CDD:214567 228/263 (87%)
CNH 1183..1484 CDD:214481 232/300 (77%)
map4k4XP_002934552.1 STKc_MAP4K4_6_N 8..289 CDD:270806 240/279 (86%)
CNH 1085..1383 CDD:214481 232/300 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 480 1.000 Domainoid score I416
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1126 1.000 Inparanoid score I227
OMA 1 1.010 - - QHG46069
OrthoDB 1 1.010 - - D246443at33208
OrthoFinder 1 1.000 - - FOG0001422
OrthoInspector 1 1.000 - - otm48244
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X885
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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