Protein Alignment Ref1 and AT1G66260

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_564871.1
• Gene: AT1G66260 / 842943
• AraportID: AT1G66260
• Length: 295
• Species: Arabidopsis thaliana
• Alignment Length: 298
• Identity: 95/298 - (31%)
• Similarity: 154/298 - (51%)
• Gaps: 49/298 - (16%)

  Fly     1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKT----GGQQRFAGGARRGGANAGGSPRKPGS 61
            |.|.:.|:||:|:|.::|::...|..||.|.:||:    ||.....||.|      ||.|.:.|.
plant     1 MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGR------GGGPVRRGP 59

  Fly    62 VLKGPRGGVAAGAVQKAKFPRGDVNSAW--KHDMYDGPKRG-AVGGGSGPTRLIVGNLDYGVSNT 123
            :....|   .:.:....|..|...:..|  ::|:|:...|. .|.|....|.:.:.|||.||:|.
plant    60 LAVNTR---PSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNE 121

  Fly   124 DIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDV 188
            ||:||:.:.|.:|:.|:|||::||..|:|:|::.||:||::|:::|:.|.||||||.:::...:.
plant   122 DIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGGNT 186

  Fly   189 AVLTRPVAAT--------DVKR-----------RVG---GTAPTSFK-------RGGGQAGGTAR 224
            .  :.||||.        .:||           |||   |:.|:..:       :||..||....
plant   187 E--SAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRGRGSGPSGRRLPLQQNQQGGVTAGRGGF 249

  Fly   225 RGFKRPVGGKPA--AGGQRRERKAPPTAEELDAELDSY 260
            ||..|..||...  :||:..::....:|.:||.:|:||
plant   250 RGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESY 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	55/159 (35%)
		RRM_THOC4	109..183	CDD:410081	35/73 (48%)
		FoP_duplication	202..>260	CDD:464005	21/80 (26%)
AT1G66260	NP_564871.1	RRM_THOC4	107..181	CDD:410081	35/73 (48%)