Protein Alignment Ref1 and Y14

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_564591.1
• Gene: Y14 / 841576
• AraportID: AT1G51510
• Length: 202
• Species: Arabidopsis thaliana
• Alignment Length: 193
• Identity: 48/193 - (24%)
• Similarity: 74/193 - (38%)
• Gaps: 33/193 - (17%)

  Fly    44 GARRGGANAGGSPRKPGSVLKGPRGGVAAGAVQKAKFPRG-----DVNSAWKHDMYDGPKRGAVG 103
            |....||:.  |||.....||....|....:.:|.| .||     |.:...:....|....|: .
plant    23 GTAIDGADV--SPRAGHPRLKSAIAGANGESAKKTK-GRGFREEKDSDRQRRLSSRDFESLGS-D 83

  Fly   104 GGSGPTR------LIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRAD 161
            |..||.|      ::|..:.......||...|.|||.||...::.| |||...|.|.:.:|::.:
plant    84 GRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEE 148

  Fly   162 ALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAGGTAR 224
            |..||...:|..|..:.:::..|.|.                 |.:...|::|...:.|.:.|
plant   149 AQSAISAMNGAELLTQNVSVDWAFSS-----------------GPSGGESYRRKNSRYGRSQR 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	41/151 (27%)
		RRM_THOC4	109..183	CDD:410081	22/80 (28%)
		FoP_duplication	202..>260	CDD:464005	5/23 (22%)
Y14	NP_564591.1	RRM_RBM8	89..176	CDD:409762	24/103 (23%)