Protein Alignment Ref1 and SR45a

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_563787.2
• Gene: SR45a / 837246
• AraportID: AT1G07350
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 140
• Identity: 36/140 - (25%)
• Similarity: 50/140 - (35%)
• Gaps: 30/140 - (21%)

  Fly    97 PKRGAVGGGSGP-TRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVH-----YDRSGRSLGTADVI 155
            |.|........| ..|.|..|.:.|:..|:::.|...|  |...||     :.|..|..|.  :.
plant    62 PTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEG--KVTDVHLVLDPWTRESRGFGF--IS 122

  Fly   156 FERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAG 220
            .:...||.:.|:......|.||.:|::.|                 ||..|..||..|..|.:
plant   123 MKSVGDANRCIRSLDHSVLQGRVITVEKA-----------------RRRRGRTPTPGKYLGLR-- 168

  Fly   221 GTARRGFKRP 230
             |||...|.|
plant   169 -TARGRHKSP 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	23/92 (25%)
		RRM_THOC4	109..183	CDD:410081	20/78 (26%)
		FoP_duplication	202..>260	CDD:464005	12/29 (41%)
SR45a	NP_563787.2	RRM	74..151	CDD:440488	20/80 (25%)