DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ref1 and AT5G59950

DIOPT Version :9

Sequence 1:	NP_651968.1	Gene:	Ref1 / 44029	FlyBaseID:	FBgn0010774	Length:	266	Species:	Drosophila melanogaster
Sequence 2:	NP_001190572.1	Gene:	AT5G59950 / 836117	AraportID:	AT5G59950	Length:	245	Species:	Arabidopsis thaliana

Alignment Length:	268	Identity:	105/268 - (39%)
Similarity:	136/268 - (50%)	Gaps:	47/268 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 IEMSLDDIIKSTRSQKKPQAARGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPGSVLKGPRGG 69
            ::|||||:|...|.      :|||.|.||.||.... .|..||...|               |..
plant     5 LDMSLDDMIAKNRK------SRGGAGPARGTGSGSG-PGPTRRNNPN---------------RKS 47

  Fly    70 VAAGAVQKAKFPRGDVNSAWKHDMYDGPK------RGAVGGGSGPTRLIVGNLDYGVSNTDIKEL 128
            ..:...|.||.|    .|.|.|||:....      |.:.|..:| |:|.:.||||||.|.|||||
plant    48 TRSAPYQSAKAP----ESTWGHDMFSDRSEDHRSGRSSAGIETG-TKLYISNLDYGVMNEDIKEL 107

  Fly   129 FNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTR 193
            |.:.|.:|:..||:||||||.|||:|::.||.|||.|:|:|:.|.|||:||.|::..:::
plant   108 FAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNL----- 167

  Fly   194 PVAATDVKRRVGGT---APTSFKRGGGQAGGTARRGFKRPVGGKPAAGGQRRERKAPP---TAEE 252
            ..||....|...|.   ||.|   .|||..|..:||..|..||:...|..||..|.|.   :||:
plant   168 QTAAAPSGRPANGNSNGAPWS---RGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAED 229

  Fly   253 LDAELDSY 260
            |||:||.|
plant   230 LDADLDKY 237

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	RRM	<108..>187	CDD:223796	44/78 (56%)
		RRM_THOC4	109..183	CDD:241124	44/73 (60%)
		FoP_duplication	214..>265	CDD:290576	22/50 (44%)
AT5G59950	NP_001190572.1	RRM_THOC4	88..162	CDD:410081	44/73 (60%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	95	1.000	Domainoid score	I2494
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H38099
Inparanoid	1	1.050	151	1.000	Inparanoid score	I1704
OMA	1	1.010	-	-		QHG58344
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	1	1.000	-	-		FOG0001223
OrthoInspector	1	1.000	-	-		otm2485
orthoMCL	1	0.900	-	-		OOG6_101458
Panther	1	1.100	-	-	O	PTHR19965
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X843
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.930