Protein Alignment Ref1 and AT5G02530

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_195873.2
• Gene: AT5G02530 / 831923
• AraportID: AT5G02530
• Length: 292
• Species: Arabidopsis thaliana
• Alignment Length: 298
• Identity: 112/298 - (37%)
• Similarity: 155/298 - (52%)
• Gaps: 60/298 - (20%)

  Fly     5 IEMSLDDIIKSTRSQKKPQAA--RGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPGSVLKGPR 67
            ::|||||||||.|   ||..:  |||.||...|||:    ||:   |:|:|.|.|....|  |.|
plant     5 LDMSLDDIIKSNR---KPTGSRGRGGIGGGNNTGGR----GGS---GSNSGPSRRFANRV--GAR 57

  Fly    68 GGVAAGAVQKAKFPRGDVNSAWKHDMY--DGPKRGA--------VGGGSG---PTRLIVGNLDYG 119
            ....:..:|:.:..    ::.|::|::  |.....|        |||||.   .|:|.:.|||||
plant    58 TAPYSRPIQQQQAH----DAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYG 118

  Fly   120 VSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
            |||.||||||::.|.:|:..:||||||||.|||:|:|.||.|||.|:|:|:.|.|||:.|.|::.
plant   119 VSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIV 183

  Fly   185 VSDVAVLTRPVAAT----------------DVKRRVGGTAPTSFK-----------RGGGQAGGT 222
            .::::....|:.||                :......|....:|:           ||||..||.
plant   184 GTNLSAPALPILATAQIPFPTNGILGNFNENFNGNFNGNFNGNFRGRGRGGFMGRPRGGGFGGGN 248

  Fly   223 ARRGFKRPVGGKPAAGGQRRERKAPPTAEELDAELDSY 260
            .|.|  |...|:...|...|.|....:||:||||||.|
plant   249 FRGG--RGARGRGGRGSGGRGRDENVSAEDLDAELDKY 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	69/165 (42%)
		RRM_THOC4	109..183	CDD:410081	45/73 (62%)
		FoP_duplication	202..>260	CDD:464005	23/68 (34%)
AT5G02530	NP_195873.2	RRM_THOC4	108..182	CDD:410081	45/73 (62%)