Protein Alignment Ref1 and AT5G09880

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_568220.1
• Gene: AT5G09880 / 830848
• AraportID: AT5G09880
• Length: 527
• Species: Arabidopsis thaliana
• Alignment Length: 186
• Identity: 41/186 - (22%)
• Similarity: 74/186 - (39%)
• Gaps: 41/186 - (22%)

  Fly   104 GGSGPT--RLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRADALKA 165
            ||:||.  :|.||||.:.:|...::::|..|||::...:..| .:|:..|...:.|. :.:..||
plant   258 GGTGPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFV-QLEHSKA 321

  Fly   166 IKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVG--GTAPTSFKRGGGQAGGTA----- 223
            .:    :.|:|:          :.:..|.:..:.|...:|  .:||.|........||.|
plant   322 AQ----IALNGK----------LEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQS 372

  Fly   224 ---------RRGFKRPVGG-------KPAAGGQRRERKAPPTAEELDAELDSYIND 263
                     |.|....:.|       ..||..|.....:.||:......:.|::|:
plant   373 RAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNE 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	22/82 (27%)
		RRM_THOC4	109..183	CDD:410081	18/76 (24%)
		FoP_duplication	202..>260	CDD:464005	15/80 (19%)
AT5G09880	NP_568220.1	SF-CC1	85..517	CDD:273721	41/186 (22%)