Protein Alignment Ref1 and Gm8764

DIOPT Version :9

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001257829.1
• Gene: Gm8764 / 667692
• MGIID: 3643666
• Length: 264
• Species: Mus musculus
• Alignment Length: 296
• Identity: 106/296 - (35%)
• Similarity: 141/296 - (47%)
• Gaps: 78/296 - (26%)

  Fly     1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTG-GQQRFAGGARRGGANAGGSPRKPGSVLK 64
            |.||::|||:||||.|:.|   |.....|......| |.:|:......||.|.
Mouse     4 MADKMDMSLEDIIKLTKIQ---QRRHDRPDSRVNRGTGSKRYRPAFTHGGRNR------------ 53

  Fly    65 GPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGA----VGGGSGPTRLIVGNLDYGVSNTDI 125
                  .|...:..:.|     ..|:||::.|..||.    .||     :|.:.||.:|||:.||
Mouse    54 ------LAPYCRPKQLP-----DKWQHDLFIGGFRGQNHVDTGG-----KLFLSNLHFGVSDADI 102

  Fly   126 KELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAV 190
            :.||.:||.:||:||||||.|||||||.|.|||:||||||:::|:|.|||||||.||||.|.:..
Mouse   103 QLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDR 167

  Fly   191 LTRPVAATDVKRRVGGTAPTSFKRGGG--QAGGTARRGFKRPVGGKPAAG--------------- 238
            ..||..:   |.|.|.|.    ..|.|  ..|||.    |..:||....|
Mouse   168 QGRPAQS---KNRGGMTR----NPGSGVLSGGGTK----KWTLGGSQGRGRGTIRNSKLQQQQQQ 221

  Fly   239 --------------GQRRERKAPPTAEELDAELDSY 260
                          .|:::::...:||||||:||:|
Mouse   222 QKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAY 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	RRM	<108..>187	CDD:223796	50/78 (64%)
		RRM_THOC4	109..183	CDD:241124	47/73 (64%)
		FoP_duplication	214..>265	CDD:290576	19/78 (24%)
Gm8764	NP_001257829.1	FYTT	6..>59	CDD:284488	20/73 (27%)
		RRM	<79..>186	CDD:223796	59/118 (50%)
		RRM_THOC4	86..160	CDD:241124	48/78 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910