Protein Alignment Ref1 and hnrnpd

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001025523.1
• Gene: hnrnpd / 594903
• XenbaseID: XB-GENE-988375
• Length: 295
• Species: Xenopus tropicalis
• Alignment Length: 178
• Identity: 48/178 - (26%)
• Similarity: 68/178 - (38%)
• Gaps: 22/178 - (12%)

  Fly    54 GSPRKPGSVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAVGGGSGPT-RLIVGNLD 117
            |..|..|.||.....||.....||.....|.|..         |||........|. ::.||.|.
 Frog    76 GRSRGFGFVLFKESEGVDKVMEQKEHKLNGKVID---------PKRAKAMKTKEPVKKIFVGGLS 131

  Fly   118 YGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRADALKAI--KQYHGVPLDGRPM 179
            .......|:|.|..||.|:...:..| ::.:..|...:.| :..|.:|.|  |:||.|.|.  ..
 Frog   132 PDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITF-KEEDPVKKIMEKKYHNVGLS--KC 193

  Fly   180 TIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAGGTARRGF 227
            .|::|:|......:....|    |.||:  :|..||.|....|..:|:
 Frog   194 EIKVALSKEQYQQQQQWGT----RGGGS--SSRPRGRGGVSQTWSQGY 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	36/133 (27%)
		RRM_THOC4	109..183	CDD:410081	21/77 (27%)
		FoP_duplication	202..>260	CDD:464005	9/26 (35%)
hnrnpd	NP_001025523.1	RRM1_hnRNPD	40..113	CDD:410150	13/45 (29%)
		RRM2_hnRNPD	124..198	CDD:241027	21/76 (28%)