DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref1 and Eif3g

DIOPT Version :10

Sequence 1:NP_651968.1 Gene:Ref1 / 44029 FlyBaseID:FBgn0010774 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_058572.2 Gene:Eif3g / 53356 MGIID:1858258 Length:320 Species:Mus musculus


Alignment Length:40 Identity:11/40 - (27%)
Similarity:18/40 - (45%) Gaps:9/40 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TEKVCAVTEEKCLNLATVVQGTMQMF----EKDGCIEFMC 116
            :||:|    |..::...|..|..|.:    |.|. :.|:|
Mouse   330 SEKIC----EPTVSSGAVQSGQGQSWISRPETDR-LNFIC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref1NP_651968.1 sex-lethal 31..>184 CDD:273740 11/40 (28%)
RRM_THOC4 109..183 CDD:410081 3/8 (38%)
FoP_duplication 202..>260 CDD:464005
Eif3gNP_058572.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60
eIF3G 62..173 CDD:240597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..233
RRM_eIF3G_like 240..315 CDD:409842
Blue background indicates that the domain is not in the aligned region.

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