Protein Alignment Ref1 and Tra2a

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001119768.2
• Gene: Tra2a / 500116
• RGDID: 1562563
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 150
• Identity: 48/150 - (32%)
• Similarity: 73/150 - (48%)
• Gaps: 21/150 - (14%)

  Fly    98 KRGAVGGGSGP---TRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFER 158
            :|...|..:.|   |.|.|..|....:..|::|:|:.:||:....|.|| |:|||.|.|.|.|||
  Rat   103 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 167

  Fly   159 RADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAGGTA 223
            ..|:.:|:::.:|:.||||.:.:..:::..|  ..|.....:.|      ||....|||..||.
  Rat   168 IDDSKEAMERANGMELDGRRIRVDYSITKRA--HTPTPGIYMGR------PTHSGGGGGGGGGG- 223

  Fly   224 RRGFKRPVGGKPAAGGQRRE 243
                    ||....||:||:
  Rat   224 --------GGGGGGGGRRRD 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	32/89 (36%)
		RRM_THOC4	109..183	CDD:410081	29/74 (39%)
		FoP_duplication	202..>260	CDD:464005	14/41 (34%)
Tra2a	NP_001119768.2	RRM_TRA2	116..195	CDD:409798	29/78 (37%)