Protein Alignment Ref1 and tra2b

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001006878.1
• Gene: tra2b / 448667
• XenbaseID: XB-GENE-5864557
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 285
• Identity: 65/285 - (22%)
• Similarity: 104/285 - (36%)
• Gaps: 93/285 - (32%)

  Fly    37 GQQRFA----------GGARRGGANAGGSPRKPGSVLKGPRGGVAAGAVQKAK------------ 79
            |:|.:|          |.||:.|.:|..||....:..:...|...:.:..:::
 Frog     5 GEQNYADRESRSASRSGSARQSGKSASQSPNHSAARSRSKEGSRHSRSKTRSRSDSRSRSRRSSR 69

  Fly    80 --FPRGDVNS-------------------AWKHDMYDGPKRGAVGGGSGPTR---LIVGNLDYGV 120
              :.|....|                   :..|... ..:|..||..:.|..   |.|..|....
 Frog    70 RHYTRSRTRSRSRRRSRSRSHSRDYRRRRSHSHSPM-STRRRHVGNRANPDPNCCLGVFGLSLYT 133

  Fly   121 SNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLA 184
            :..|::|:|:.:|||...::.|| :|.||.|.:.|.||...||.:|.::.:|:.||||.:.:
 Frog   134 TERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRV--- 195

  Fly   185 VSDVAVLTRPVAAT-----------DVKRR--------VGGTAPTSF----KRGGGQAGGTARRG 226
              |.::..||...|           ..:||        .||.....:    .||||..||..|
 Frog   196 --DFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGGYDDREYYSRSYRGGGGGGGGWR-- 256

  Fly   227 FKRPVGGKPAAGGQRRE----RKAP 247
                       |||.|:    |::|
 Frog   257 -----------GGQDRDQFSRRRSP 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	44/193 (23%)
		RRM_THOC4	109..183	CDD:410081	26/77 (34%)
		FoP_duplication	202..>260	CDD:464005	17/62 (27%)
tra2b	NP_001006878.1	RRM_TRA2	121..200	CDD:409798	27/83 (33%)