Protein Alignment Ref1 and hnrnpdl

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001315423.1
• Gene: hnrnpdl / 406701
• ZFINID: ZDB-GENE-040426-2717
• Length: 296
• Species: Danio rerio
• Alignment Length: 139
• Identity: 32/139 - (23%)
• Similarity: 56/139 - (40%)
• Gaps: 35/139 - (25%)

  Fly    79 KFPRGDVNSAWKHDMYDGPKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD 143
            :||.|...:|.|:...||             ::.:|.|.:..|..|:.:..:.||.:....:..|
Zfish    13 EFPEGSKINASKNQEDDG-------------KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTD 64

  Fly   144 -RSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRR---- 203
             .:|||.|...|:| :.|:::..:.:.....|||:             |..|..|..:|.:
Zfish    65 PLTGRSRGFGFVLF-KDAESVDRVLELTEHKLDGK-------------LIDPKRAKAIKGKEPPK 115

  Fly   204 ---VGGTAP 209
               |||.:|
Zfish   116 KVFVGGLSP 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	24/105 (23%)
		RRM_THOC4	109..183	CDD:410081	17/74 (23%)
		FoP_duplication	202..>260	CDD:464005	4/15 (27%)
hnrnpdl	NP_001315423.1	RRM_SF	31..106	CDD:473069	19/88 (22%)
		RRM2_hnRPDL	116..190	CDD:409998	4/9 (44%)