Protein Alignment Ref1 and Rbp6

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Alignment Length: 134
• Identity: 36/134 - (26%)
• Similarity: 55/134 - (41%)
• Gaps: 23/134 - (17%)

  Fly    77 KAKFPRGDVNSAWKH-DMYDGPKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAV 140
            |..|||.      .| .|....|:..|||.|.||.|           .|:|..|..||||:.|.:
  Fly   102 KVAFPRR------AHPKMVTRTKKIFVGGLSAPTTL-----------EDVKSYFEQFGPIEDAML 149

  Fly   141 HYDR-SGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRV 204
            .:|: :.|..|...|.|:.. |.:..:.:.|...::.:.:..:.|.....:|...:|.|   |..
  Fly   150 MFDKQTNRHRGFGFVTFQSE-DVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKT---RAA 210

  Fly   205 GGTA 208
            |.:|
  Fly   211 GRSA 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	29/108 (27%)
		RRM_THOC4	109..183	CDD:410081	17/74 (23%)
		FoP_duplication	202..>260	CDD:464005	3/7 (43%)
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	1/2 (50%)
		RRM2_MSI	119..192	CDD:240769	22/84 (26%)