Protein Alignment Ref1 and Ref2

DIOPT Version :9

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001246007.1
• Gene: Ref2 / 34667
• FlyBaseID: FBgn0032439
• Length: 220
• Species: Drosophila melanogaster
• Alignment Length: 233
• Identity: 81/233 - (34%)
• Similarity: 117/233 - (50%)
• Gaps: 45/233 - (19%)

  Fly     1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPGSVLKG 65
            |.||::||||||||...::.|...|:           .:|..||:.|...:.||        |:|
  Fly     1 MSDKMKMSLDDIIKMKFNKNKFVNAK-----------NERVQGGSIRKRNSEGG--------LRG 46

  Fly    66 -PRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELF 129
             .|.....|.::|:||.        :..:...||:        ||.::|.||||||.:.||.|||
  Fly    47 IQRSRNGTGFIRKSKFK--------QETLLKPPKK--------PTLVMVCNLDYGVDDDDIMELF 95

  Fly   130 NDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRP 194
            |..|.::|..|||||.|.|||||.:.|:.|.:|.:.|:|:|||.||||.:.:.|..:     ||.
  Fly    96 NQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLVQN-----TRN 155

  Fly   195 VAATDV---KRRVGGTAPTSFKRGGGQAGGTARRGFKR 229
            ...|||   ..|: |:..|.|.:.|.....:.:.||::
  Fly   156 FKRTDVDDLSLRM-GSFKTRFLQNGTFKTRSLQNGFQK 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	RRM	<108..>187	CDD:223796	41/78 (53%)
		RRM_THOC4	109..183	CDD:241124	39/73 (53%)
		FoP_duplication	214..>265	CDD:290576	3/16 (19%)
Ref2	NP_001246007.1	RRM	2..>198	CDD:223796	80/232 (34%)
		RRM_SF	75..149	CDD:302621	39/73 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	56	1.000	Domainoid score	I3154
eggNOG	1	0.900	-	-		E1_KOG0533
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	67	1.000	Inparanoid score	I1955
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1369069at2759
OrthoFinder	1	1.000	-	-		FOG0001223
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101458
Panther	1	1.100	-	-	P	PTHR19965
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	8	7.870