Protein Alignment Ref1 and srsf2b

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_955945.2
• Gene: srsf2b / 323700
• ZFINID: ZDB-GENE-030131-2420
• Length: 220
• Species: Danio rerio
• Alignment Length: 148
• Identity: 41/148 - (27%)
• Similarity: 60/148 - (40%)
• Gaps: 34/148 - (22%)

  Fly   107 GPTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYDR-SGRSLGTADVIFERRADALKAIKQYH 170
            |.|.|.|.||.|..|...::.:|..:|.:....:..|| :..|.|.|.|.|..:.||..|:....
Zfish    12 GMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMD 76

  Fly   171 GVPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSF-------KRGGGQAGGTARRGFK 228
            |..||||.:.:|:|..                   |..|.|:       :||.|..||:.|.|.:
Zfish    77 GAILDGRELRVQMARY-------------------GRPPDSYYGGGGGGRRGSGGGGGSRRHGAR 122

  Fly   229 RPVGGKPAAGGQRRERKA 246
            |       :...||.|::
Zfish   123 R-------SRSPRRRRRS 133

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	26/77 (34%)
		RRM_THOC4	109..183	CDD:410081	24/74 (32%)
		FoP_duplication	202..>260	CDD:464005	14/52 (27%)
srsf2b	NP_955945.2	RRM_SRSF2_SRSF8	16..88	CDD:409751	23/71 (32%)