Protein Alignment Ref1 and rbmx

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_997763.1
• Gene: rbmx / 321860
• ZFINID: ZDB-GENE-030131-579
• Length: 379
• Species: Danio rerio
• Alignment Length: 166
• Identity: 50/166 - (30%)
• Similarity: 73/166 - (43%)
• Gaps: 40/166 - (24%)

  Fly   108 PTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYDR-SGRSLGTADVIFERRADALKAIKQYHG 171
            |.:|.:|.|:...|...::..|:.||.|.:..:..|| :.:|.|.|.|.:|...||..|.::.:|
Zfish     7 PGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNG 71

  Fly   172 VPLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRG---------GGQAG------- 220
            .||||:|:.::.|       |:|...|..:|  |...|.|  ||         ||.:|
Zfish    72 KPLDGKPIKVEQA-------TKPQFETSGRR--GPPPPRS--RGPSRGLRGSRGGPSGMRGPPSR 125

  Fly   221 -----GTARRG---FKRPVGGKPAA-GGQRRERKAP 247
                 |.:.||   .||   |.|.. ||...:|.||
Zfish   126 EPFFKGMSSRGPPPMKR---GPPERNGGPPPKRSAP 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	25/76 (33%)
		RRM_THOC4	109..183	CDD:410081	24/74 (32%)
		FoP_duplication	202..>260	CDD:464005	21/71 (30%)
rbmx	NP_997763.1	RRM_RBMX_like	7..86	CDD:409816	26/85 (31%)
		PABP-1234	<10..204	CDD:130689	49/163 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	57..379		35/116 (30%)