| Sequence 1: | NP_651968.1 | Gene: | Ref1 / 44029 | FlyBaseID: | FBgn0010774 | Length: | 266 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_112420.1 | Gene: | HNRNPA1 / 3178 | HGNCID: | 5031 | Length: | 372 | Species: | Homo sapiens |
| Alignment Length: | 141 | Identity: | 43/141 - (30%) |
|---|---|---|---|
| Similarity: | 54/141 - (38%) | Gaps: | 38/141 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 24 AARGGPGGARKTGGQQRFAGGARRG-------GANAGGSPRKPGSVLKGPRGGVAAGAVQKAKFP 81
Fly 82 RGDVNSAW----KHDMYDGPKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFN---DFGPIKKAA 139
Fly 140 VHYDRSGRSLG 150 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ref1 | NP_651968.1 | sex-lethal | 31..>184 | CDD:273740 | 39/134 (29%) |
| RRM_THOC4 | 109..183 | CDD:410081 | 13/45 (29%) | ||
| FoP_duplication | 202..>260 | CDD:464005 | |||
| HNRNPA1 | NP_112420.1 | Globular A domain | 4..94 | ||
| RRM1_hnRNPA1 | 12..92 | CDD:410154 | |||
| Globular B domain | 95..185 | ||||
| RRM2_hnRNPA3 | 105..184 | CDD:409996 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 182..216 | ||||
| RNA-binding RGG-box | 218..240 | 9/20 (45%) | |||
| HnRNPA1 | 312..344 | CDD:463312 | 10/32 (31%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 317..372 | 9/27 (33%) | |||
| Nuclear targeting sequence (M9) | 320..357 | 9/24 (38%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||