Protein Alignment Ref1 and C02B10.4

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_500722.1
• Gene: C02B10.4 / 177283
• WormBaseID: WBGene00015329
• Length: 211
• Species: Caenorhabditis elegans
• Alignment Length: 205
• Identity: 55/205 - (26%)
• Similarity: 79/205 - (38%)
• Gaps: 73/205 - (35%)

  Fly    82 RGD-VNSAWKHDMYD----GPKR----------------GAVGGG-------------------- 105
            ||. ::..||.||:.    .||:                ||...|
 Worm    21 RGSGIDGKWKRDMFQTANRSPKQNFTTKRRAQTNFVTKAGAAAAGLATRNISTASIRGRTAPAVV 85

  Fly   106 ----SGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADAL--K 164
                :||:.||:.||...|:..|::|||..:.| :...:||..:|.|.|.||:|......|:  |
 Worm    86 REIHTGPSTLIIKNLATTVTQEDLEELFEQYEP-ELVQLHYGPTGESNGCADLIVPHAQVAIIQK 149

  Fly   165 AIKQYHGVPLDGRPMTIQLA--VSDVAVLTRPVAATDVKRRVGGTAPTSFK----------RGGG 217
            |::   ||.|||.|:.:..|  ...|:|..|      :|:...|   ..||          :||.
 Worm   150 ALE---GVLLDGEPIEVLEANPPKQVSVFDR------IKKVSRG---NDFKAKNMRVVVKSKGGF 202

  Fly   218 QAGGTARRGF 227
            |..| ||..|
 Worm   203 QKRG-ARGDF 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	40/148 (27%)
		RRM_THOC4	109..183	CDD:410081	27/75 (36%)
		FoP_duplication	202..>260	CDD:464005	10/36 (28%)
C02B10.4	NP_500722.1	RRM_Aly_REF_like	93..163	CDD:409852	27/73 (37%)