Protein Alignment Ref1 and R06C1.4

DIOPT Version :9

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_493029.1
• Gene: R06C1.4 / 173076
• WormBaseID: WBGene00011059
• Length: 84
• Species: Caenorhabditis elegans
• Alignment Length: 73
• Identity: 25/73 - (34%)
• Similarity: 38/73 - (52%)
• Gaps: 1/73 - (1%)

  Fly   113 VGNLDYGVSNTDIKELFNDFGPIKKAAVHYDR-SGRSLGTADVIFERRADALKAIKQYHGVPLDG 176
            |||:.|..:..:|...|...|.:....:.||| :||..|.|.|.|...|.|.:|::|.:||..:|
 Worm    10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNG 74

  Fly   177 RPMTIQLA 184
            |.:.:..|
 Worm    75 RNLRVNYA 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	RRM	<108..>187	CDD:223796	25/73 (34%)
		RRM_THOC4	109..183	CDD:241124	24/70 (34%)
		FoP_duplication	214..>265	CDD:290576
R06C1.4	NP_493029.1	RRM_SF	9..84	CDD:388407	25/73 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S2025
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.950