DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ref1 and Srsf10

DIOPT Version :10

Sequence 1:NP_651968.1 Gene:Ref1 / 44029 FlyBaseID:FBgn0010774 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001073856.1 Gene:Srsf10 / 14105 MGIID:1333805 Length:262 Species:Mus musculus


Alignment Length:80 Identity:26/80 - (32%)
Similarity:35/80 - (43%) Gaps:1/80 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 TRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRADALKAIKQYHGV 172
            |.|.|.|:.....:.|::..|..:|||....|..| .:.|..|.|.|.||...||..|:......
Mouse    10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRK 74

  Fly   173 PLDGRPMTIQLAVSD 187
            .:.||.:.||.|..|
Mouse    75 WICGRQIEIQFAQGD 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ref1NP_651968.1 sex-lethal 31..>184 CDD:273740 24/75 (32%)
RRM_THOC4 109..183 CDD:410081 23/74 (31%)
FoP_duplication 202..>260 CDD:464005
Srsf10NP_001073856.1 RRM_SF 5..99 CDD:473069 26/80 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..262
Blue background indicates that the domain is not in the aligned region.

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