Protein Alignment Ref1 and Tra2a

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001393046.1
• Gene: Tra2a / 101214
• MGIID: 1933972
• Length: 311
• Species: Mus musculus
• Alignment Length: 136
• Identity: 45/136 - (33%)
• Similarity: 68/136 - (50%)
• Gaps: 18/136 - (13%)

  Fly   109 TRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYD-RSGRSLGTADVIFERRADALKAIKQYHGV 172
            |.|.|..|....:..|::|:|:.:||:....|.|| |:|||.|.|.|.|||..|:.:|:::.:|:
Mouse   146 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGM 210

  Fly   173 PLDGRPMTIQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAGGTARRGFKRPVGGKPAA 237
            .||||.:.:..:::..|  ..|.....:.|      ||....|||..||.         ||....
Mouse   211 ELDGRRIRVDYSITKRA--HTPTPGIYMGR------PTHSGGGGGGGGGG---------GGGGGG 258

  Fly   238 GGQRRE 243
            ||:||:
Mouse   259 GGRRRD 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	29/75 (39%)
		RRM_THOC4	109..183	CDD:410081	29/74 (39%)
		FoP_duplication	202..>260	CDD:464005	14/42 (33%)
Tra2a	NP_001393046.1	RRM_TRA2	145..224	CDD:409798	29/77 (38%)