Sequence 1: | NP_651968.1 | Gene: | Ref1 / 44029 | FlyBaseID: | FBgn0010774 | Length: | 266 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001257571.1 | Gene: | Gm21312 / 100861901 | MGIID: | 5434667 | Length: | 264 | Species: | Mus musculus |
Alignment Length: | 296 | Identity: | 106/296 - (35%) |
---|---|---|---|
Similarity: | 141/296 - (47%) | Gaps: | 78/296 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTG-GQQRFAGGARRGGANAGGSPRKPGSVLK 64
Fly 65 GPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGA----VGGGSGPTRLIVGNLDYGVSNTDI 125
Fly 126 KELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAV 190
Fly 191 LTRPVAATDVKRRVGGTAPTSFKRGGG--QAGGTARRGFKRPVGGKPAAG--------------- 238
Fly 239 --------------GQRRERKAPPTAEELDAELDSY 260 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ref1 | NP_651968.1 | RRM | <108..>187 | CDD:223796 | 50/78 (64%) |
RRM_THOC4 | 109..183 | CDD:241124 | 47/73 (64%) | ||
FoP_duplication | 214..>265 | CDD:290576 | 19/78 (24%) | ||
Gm21312 | NP_001257571.1 | FYTT | 6..>59 | CDD:284488 | 20/73 (27%) |
RRM | <79..>186 | CDD:223796 | 59/118 (50%) | ||
RRM_THOC4 | 86..160 | CDD:241124 | 48/78 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1369069at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |