Protein Alignment Ref1 and poldip3

DIOPT Version :9

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: XP_009297280.3
• Gene: poldip3 / 100536140
• ZFINID: ZDB-GENE-120201-2
• Length: 520
• Species: Danio rerio
• Alignment Length: 119
• Identity: 39/119 - (32%)
• Similarity: 56/119 - (47%)
• Gaps: 17/119 - (14%)

  Fly    81 PRGDVNSAWKHDMYDGPKRGAVGGGSGPTRLIVGNLDYGVSNTDIKELFNDFGPIKKAAVHYDRS 145
            |.|...||..|.    |.:.......| |::.|.||...|:..||.|||...|.:|:|.:
Zfish   340 PAGRDTSAQTHT----PTQPVFSPLEG-TKITVTNLHPRVTEEDIVELFCVCGALKRARL----- 394

  Fly   146 GRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQL------AVSDVAVLTR 193
             ..:|.|:|:|.|:.||:.|.::|:...|||:||...|      ..||..:|.|
Zfish   395 -AKVGVAEVVFVRKEDAVSAYRKYNNRCLDGQPMKCNLHMQGSVITSDQPILLR 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	RRM	<108..>187	CDD:223796	28/84 (33%)
		RRM_THOC4	109..183	CDD:241124	27/73 (37%)
		FoP_duplication	214..>265	CDD:290576
poldip3	XP_009297280.3	RRM_SKAR	363..431	CDD:241125	27/73 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR19965
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.010