Protein Alignment Ref1 and Alyreffm9

DIOPT Version :10

• Sequence 1: NP_651968.1
• Gene: Ref1 / 44029
• FlyBaseID: FBgn0010774
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: NP_001160108.1
• Gene: Alyreffm9 / 100043247
• MGIID: 3782493
• Length: 289
• Species: Mus musculus
• Alignment Length: 310
• Identity: 100/310 - (32%)
• Similarity: 140/310 - (45%)
• Gaps: 81/310 - (26%)

  Fly     1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTG-GQQRFAGGARRGGANAGGSPRKPGSVLK 64
            |.||::|||:||:|..:.|   |.....|....|.| |.:|:.......|.|.
Mouse     4 MADKMDMSLEDILKLNKMQ---QGRLDRPDSRVKRGTGPKRYRPAFTHDGRNR------------ 53

  Fly    65 GPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGA----VGGGSGPTRLIVGNLDYGVSNTDI 125
                  .|...:..:.|     ..|:||::.|..||.    .||     :|.:.||.:|||:.||
Mouse    54 ------LAPYCRPKQLP-----DKWQHDLFIGGFRGQNHVDTGG-----KLFLSNLHFGVSDADI 102

  Fly   126 KELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSDVAV 190
            :.||.:||.:||:||||||.|||||||.|.|||:||||||:::|:|.|||||||.|.|..|.:..
Mouse   103 QLLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTSQIDR 167

  Fly   191 LTRPVAATD---VKRRVG-----GTAPTSFKRGG--GQAGGTARRG------------------- 226
            ..||...:|   :.|..|     |.....:..||  |:..||:|..
Mouse   168 QGRPALNSDKGGMTRNPGSGVLSGGGNKRWTLGGSQGRGRGTSRNSKLQQQQQQQQQQQQQQQQQ 232

  Fly   227 ---------------FKRPVGGKPAAGGQRRERKAPP-TAEELDAELDSY 260
                           .::..|.......|::|::... :.|||||:||:|
Mouse   233 EEQKHQKQQQQKQQQQQQKQGQNHQHQQQQKEKELQQLSVEELDAQLDAY 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ref1	NP_651968.1	sex-lethal	31..>184	CDD:273740	63/157 (40%)
		RRM_THOC4	109..183	CDD:410081	47/73 (64%)
		FoP_duplication	202..>260	CDD:464005	19/99 (19%)
Alyreffm9	NP_001160108.1	RRM_THOC4	86..160	CDD:410081	48/78 (62%)