DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbb and znf608

DIOPT Version :9

Sequence 1:NP_001261074.1 Gene:sbb / 44027 FlyBaseID:FBgn0285917 Length:2330 Species:Drosophila melanogaster
Sequence 2:XP_002663202.3 Gene:znf608 / 100329407 ZFINID:ZDB-GENE-131107-1 Length:1281 Species:Danio rerio


Alignment Length:1604 Identity:331/1604 - (20%)
Similarity:495/1604 - (30%) Gaps:562/1604 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   797 GQNSNAGGNGG--------SESKAAAAAQAKLMAPGMISATMHHTISVPAGTGTGDDDTKSPPAK 853
            |:...|.|.|.        ..|..||.|:.|....|...|......|..:......|:...|..:
Zfish   121 GKRREAQGRGDMSSAPSPTDSSPEAAPARPKDGKKGKNKAVRREKESTKSRKEKPSDEFGGPATE 185

  Fly   854 RVKHEAGASG--AGGGKEMVDI----------CIGT---SVGTIT-------EPDCLGPCEPGTS 896
            ......|:.|  ..||.:...|          .:|.   ||||.|       |...:.||:||||
Zfish   186 NGSAFGGSEGLVGRGGMDAAAIVDDAEEHSLRTLGVKTRSVGTNTQESEKALESSYMEPCQPGTS 250

  Fly   897 VTLEGIVWHETEGGVLVVNVTWRGKTYVGTLLDCTRHDWAPPRFCDSPTEELDSRTPKGRGKRGR 961
            |.||||||||||.||||||||||.:||||||||||:|||||||||:||..:.:....:|||||.|
Zfish   251 VNLEGIVWHETEEGVLVVNVTWRKRTYVGTLLDCTKHDWAPPRFCESPVSDSEMPCARGRGKRMR 315

  Fly   962 SAGLTPDLSNFTETRSSIYFSHAQVHSKLRNGATKGRGATRSASGNAAANSNSSSSGN-GGGATP 1025
            .|  .||..|...:.|                  |.||.|....|....|.....|.| .|..||
Zfish   316 LA--IPDQPNAEPSLS------------------KMRGLTHKRRGVGIGNKGRRGSLNLSGCRTP 360

  Fly  1026 ---STSPTAFLPPRPEKRKSKDEAPSPLNGDASDGASVGGIGGAGGVNMVNASGIPISASGGGLA 1087
               :...|...|....|||||..|...|...:.|              :.|.:|..|.|......
Zfish   361 GYYAVEDTKSSPLICGKRKSKAPADLDLTLVSED--------------IRNGNGKRIRAKSRSAP 411

  Fly  1088 TQPQSLLNPVTGLNVQISTKKCKTASPCAISPVLLECPEQDCSKKYKHANGLRYHQSHAHGAGGG 1152
            :.||...:||....|            || ||:|::||..:|:|||||.|||||||||||     
Zfish   412 STPQGKSDPVFLDQV------------CA-SPMLIDCPHPNCNKKYKHINGLRYHQSHAH----- 458

  Fly  1153 ASSMDEDSMQ----APEDPATPPSPGVASGTGSGASVASSAVPATAPSAGQGTVAVSPNTPLANS 1213
               ::.||.|    ..||..:.....:.|                              .|..:|
Zfish   459 ---LNNDSKQDFEVESEDRLSDFDEAINS------------------------------VPFESS 490

  Fly  1214 SNPVTNGNVAP----SAPATGSVTIAAPNTTPSVVETQAPLTGPPPVTPPAPTPICAVATPGAEQ 1274
            .|.|:.   .|    ...|.||     |.:..:::...:                .:||.....|
Zfish   491 ENIVSK---KPRGMYKLNAAGS-----PKSRKALISNDS----------------SSVANAKLRQ 531

  Fly  1275 SV----SSVLPLGNLPLTAGPNSATQ---QQQPPTQQQQPQLLVPGGSAASLQQQQQQQQPVAGG 1332
            :|    :|:..|.||||.:..:...:   .....|..:.|:|...|    ::.::....:.....
Zfish   532 NVVNKDASIDDLSNLPLISNMSVVLENCLMTDRNTSVEMPKLEAEG----AIDKRDVCSKIKKDS 592

  Fly  1333 SITAGISGQALSQHQQQLMGGLPAMLSDQQQQALLQQGALKAGVLRFGPPDGNPLQQQPGQASVN 1397
            ..|...||::   ...:|:...||                        ||   .|...|..|...
Zfish   593 GFTERCSGKS---RNNRLVNAAPA------------------------PP---KLTAIPPAAFST 627

  Fly  1398 PQTQQSPPRPPSHVQDQQTPSAYAQQA-GLKTSPGFGSVGVGA---------ASSKQKKNRKSPG 1452
            ..|:.|     ||   |.:|:....:| .|...|....:.|.|         ..||..|.::...
Zfish   628 KITEVS-----SH---QASPTVSLTKAKNLTLKPIKPKLDVIAQVNMSNTTVVLSKDSKRKEKHR 684

  Fly  1453 PSDFEGRVSREDVQSPAYSDISDDSTPVAEQEMLDKSVGQAVTAKHIELMGKKPTEVGVGVPPPP 1517
            ..|..|:..|.......|..:.|..:       :.|....::..:|:                  
Zfish   685 LKDRNGKDPRSPKSDLIYQKMEDTKS-------ISKDFPVSLLKEHL------------------ 724

  Fly  1518 APNMYVPGMYQFYPAQQQSAPPPQQQQQQPQYMVQTEPGKPPGLPPALTQAQQQQQLQPGAPPPT 1582
                          ::|.....|.:.|:.....::.|             |.:.......||.|:
Zfish   725 --------------SKQDVLNGPSETQESRMASIRAE-------------ADKVYTFSDNAPSPS 762

  Fly  1583 SQPPSHLLGPPGQQSVAAHLADYSG---KNKDPPLDLMTKPQPQPGQPPSQQQQSGQLSGQENNG 1644
                   :|...:..... |.:..|   |...|....::......|    ...:|.:.|.||:||
Zfish   763 -------IGSSARIDCGT-LTNGDGATTKTNSPAYSDISDATEDGG----SNSRSRRNSTQESNG 815

  Fly  1645 KDVGPPTSQPGSQPPPVNLSAVAGPPPGSLPPGLGGLSALGAAGLGGPGPGKGM---PHFYPFNF 1706
            .    |.....|..|.|.                               |||.:   .|.|..:.
Zfish   816 N----PKIPSISTAPTVT-------------------------------PGKDVQSHAHAYESHC 845

  Fly  1707 IPPAYPYNVDPNFGSVSIVASEEAAKLSGHPGLPPSSQAQ-QLSGISIKEERLKESPSPHDQ--- 1767
            ||              ..:.|.:|:..|.|....|.|:.: :|..:   :|.:| ||....|   
Zfish   846 IP--------------GFMHSSQASSTSFHKVASPYSRTKDELRDL---DEDIK-SPESSSQLQY 892

  Fly  1768 -PKHMPSQQQMIASKLIKQEPMTKQEIKQEPNSNPGQQHPPPQQQPAPQPQQQQPPPPQPQQPHA 1831
             ..|....|.:...:..:...| .|::...|:|     |.|..:  |...:.|.....:.|....
Zfish   893 AETHTALAQSLYYGQYSRNVSM-NQKVLMMPDS-----HRPLTE--ACCEEMQYSKQSRGQVRRG 949

  Fly  1832 LHPKDLQALGAYPAIYQRHSINLAVQQAREEELRRYYMFTGRQNSAAAAAAAAAQNAASGGLPPH 1896
            ...||                     :.:||:.:    |.|...::..||.:...|.|.      
Zfish   950 SEQKD---------------------RTKEEQKQ----FIGSPQASHKAANSVKINCAK------ 983

  Fly  1897 PGMMHKDEPGMGSAAQQQQQQQQQQMQIAQQQQQAIQQHHQHLQQQHQAQQ-------------Q 1948
            ||.::.:       ..:|...|||    .:.::||:.:..:.|..:....:             :
Zfish   984 PGFIYVE-------LDKQMSFQQQ----GRPKEQAVLKESEDLSLESSNSKSNVDTNVTFLNASE 1037

  Fly  1949 QQQQQHQQQQQQQQQQQQQQQQQQQQQKLKQSQA--------ASAGANNKATNLTKDSPKQKGGD 2005
            .|...|..|.:..:||..:..:..::..|...:.        :...|..|...:...|.:....:
Zfish  1038 SQSWSHSYQSKYVKQQNHEVNKISEELSLSPEKGKDWHIEPESRLEAELKCETIADGSEENTRAE 1102

  Fly  2006 DDQPLKVKQEGQKPTMETQGPPPPPTSQYFLHPSYISPTPFGFDPNHPMYRNVLMSAAGPYNTAP 2070
            .|:   ...|..:.:..|....|.|:...:.| ||  |.....:.....||  :||.|..:|...
Zfish  1103 GDE---TSGETSEDSARTAAASPQPSFLQYQH-SY--PYLHLCETGSNAYR--VMSPALVHNYPG 1159

  Fly  2071 YHLPIPRPYHAPEDLSRNTGTK------ALDALHHAASQYYTTHKIHELSERALKSPTSGSGPVK 2129
            :|.|:.......||......:|      ||:.|.|....|:                        
Zfish  1160 FHYPLYGKTAGREDSEGAQSSKPVTDSTALELLSHPLLPYH------------------------ 1200

  Fly  2130 VSVSSPSIGPPQPGGPTSSGPGSGPVSGVLGPGSGSNQQPGSAPGSAGGVPLNLQPPPGGMGPSP 2194
                                 |..||                 ||..|               ||
Zfish  1201 ---------------------GKSPV-----------------PGERG---------------SP 1212

  Fly  2195 GSKPDLSGPKGHGGVTPGSSLDGHKQSMPGGPPPNGPSGNGAVGGVGGAAGNGAAGGGGAGAADS 2259
            ..:.:               .:..::|.|.|                                  
Zfish  1213 EQERE---------------SERERESAPFG---------------------------------- 1228

  Fly  2260 RSPPPQRHVHTHHHTHVGLGYPMYPAPY-------GAAVLASQQ 2296
                  ||:..||.||:|:.|.:....|       .||::.:||
Zfish  1229 ------RHLQAHHLTHLGMSYTLVSGQYDPFQGLSSAALVGNQQ 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbbNP_001261074.1 PRK10856 <1143..>1245 CDD:236776 20/109 (18%)
znf608XP_002663202.3 SFP1 <435..480 CDD:227516 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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