DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbb and znf608

DIOPT Version :9

Sequence 1:NP_001261074.1 Gene:sbb / 44027 FlyBaseID:FBgn0285917 Length:2330 Species:Drosophila melanogaster
Sequence 2:XP_004910537.1 Gene:znf608 / 100038177 XenbaseID:XB-GENE-491957 Length:1497 Species:Xenopus tropicalis


Alignment Length:1926 Identity:434/1926 - (22%)
Similarity:648/1926 - (33%) Gaps:648/1926 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 TNSSSSASSGSSSSSGSSSSSSKKHLNNASSGSGSSSSGGGSQNNASGHASGGGSSGSSQSTPQG 597
            :||:||:.:...|..|.:||.:   :|:.||....|......|..:||              |||
 Frog    51 SNSTSSSCTSKDSGHGLASSGA---VNSTSSTLADSLKFASIQQQSSG--------------PQG 98

  Fly   598 TKRGSSGHR-REKTKDKNAHSNRMSVDKSAAAASAAGEKDTPEKCSGTGAGGSPCSCNGDVGAPC 661
                 :.|: ..|:|.|.:.::: .|:||.|:||..|   .||  .|:||....... |.:|...
 Frog    99 -----NSHKDTSKSKVKRSKTSK-DVNKSLASASLYG---IPE--IGSGAAKQKLEA-GRLGEVA 151

  Fly   662 SHHACIRRAAHMSNSAG------NANSSAGTGQSGGSSSMSAVPPGVFTPSAGSPSTGSPSTVVP 720
            |   .:..:.|.:..||      ..|.:....::||..|.|         :.||...........
 Frog   152 S---TVGMSGHNTGGAGLNGNTTTCNKTLKDEKTGGGKSQS---------TRGSKRDKDSGKSRK 204

  Fly   721 AAASLLAATGAASSSASQMASSSAGGVGGSGGGANAPGPPGKESAGSIKISSHIAAQLAAAAASN 785
            ..::.|...|.|::..:..|.....|.|  .|.|:..|.|       ....:.:|.::|.:|..:
 Frog   205 DNSNKLYDLGHANTGVNSQAVVHLYGFG--SGKASGNGSP-------FHCGNSLAGEMAKSAVDS 260

  Fly   786 SYSGSGANTNQGQNSNAGGNGGSESKAAAAAQA----KLMAPGMISATMHHTIS--------VPA 838
            ...|:.|...:..:..........:|.....:.    .:.||   ...:|.:||        .|:
 Frog   261 GIMGNSALVKKEDDDEDEEECHRRNKKLKTEKVDPLFTVPAP---PPPVHSSISPQILPSYFSPS 322

  Fly   839 GTGTGDDDTKSPPAKRVKHEAGASGAGGGKEMVDICIGTSVGTITEPDCLGPCEPGTSVTLEGIV 903
            .|      |.:.|.:::.....:.|       ::.|   .||.:|||:|||||||||||.|||||
 Frog   323 ST------TIAAPVEQLLVRTRSVG-------INTC---DVGVVTEPECLGPCEPGTSVNLEGIV 371

  Fly   904 WHETEGGVLVVNVTWRGKTYVGTLLDCTRHDWAPPRFCDSPTEELDSRTPKGRGKRGRSAGLT-- 966
            |||||.||||||||||.|||||||||||:|||||||||||||.:|:.|..:|||||.|:|..|  
 Frog   372 WHETEEGVLVVNVTWRNKTYVGTLLDCTKHDWAPPRFCDSPTSDLEMRGGRGRGKRARTAAATTA 436

  Fly   967 --PDL-SNFTETRSSIYFSHAQVHSKLRNGAT-KGRGATRSASG-----NAAANSNSSSSGNGGG 1022
              |.: :||.|.|.        :.:|.|.||. |||....:|||     |.|.....:|....| 
 Frog   437 SAPGIDANFMEVRG--------LQTKNRGGANGKGRRGYINASGRRTPPNCAIEDVKASPSPAG- 492

  Fly  1023 ATPSTSPTAFLPPRPEKRKSKDEAPSPLNGDASD---GASVGGIGGAGGVNMVNASGIPISASGG 1084
                            |||:|.:....||..:.|   |..|          ..|:...|      
 Frog   493 ----------------KRKNKPQIELDLNSSSEDCKPGKRV----------RTNSRSTP------ 525

  Fly  1085 GLATQPQSLLNPVTGLNVQISTKKCKTA---SPCAISPVLLECPEQDCSKKYKHANGLRYHQSHA 1146
               |.||.               |..||   ..|: ||||::||..:|:|||||.|||||||:||
 Frog   526 ---TTPQG---------------KNDTAFLDQGCS-SPVLIDCPHPNCNKKYKHINGLRYHQAHA 571

  Fly  1147 H---------------------------GAGGGASSMDEDSMQAPEDPATPPSPGVASGTGSGAS 1184
            |                           ......||...|.::||..|.:..:||...|....|:
 Frog   572 HLDPENKLEFEQDSEDKVSDCEEALSNVALECNESSTSLDQLKAPMSPGSQSTPGTPKGKRDAAN 636

  Fly  1185 VASSAVPATAPSAGQG-----TVAVSPNTPLANSSNPVTNGNVAPSAPATGSVTIAAP------- 1237
            ..|:...:.......|     ||.::....::|.::.:.|.::     ..||:|:..|       
 Frog   637 NGSNQNNSLKSGKNSGKKKGLTVELNNLPVISNMASTLENCSI-----LDGSLTVEMPKLEAEGL 696

  Fly  1238 --------------NTTPSVVETQAPLTGPPPVTP-PAPTPICAVATPGAEQSVSSVLPLGNLPL 1287
                          .|...|.:..:.|....|:.| |||||...:|.||...:.::...:..||.
 Frog   697 IDKKNINEKEKVKKGTNCKVDKNISKLKTARPIAPAPAPTPPQLIAIPGTAFTNTTTGTIPGLPS 761

  Fly  1288 TAGPNSATQQQQPPTQQQQPQLLVPG------GSAASLQQQQQQQQ---------------PVAG 1331
            .|........:.||.:..||:..:.|      .|..||:.::::::               |.|.
 Frog   762 LATTVVQATPKSPPLKPIQPKPTIMGEPSTVNPSLTSLKDKKKKEKRKQKEKEKESKEAVSPKAD 826

  Fly  1332 GSIT---------AGISGQALSQH---QQQLMGGLPAMLSDQQQQALLQQGALKAGVLRFGPPDG 1384
            ..:.         ..:|||.:..|   .:.|:.|    :||.|..   :..::||...:......
 Frog   827 SKVAKVEDVKASGKDLSGQFIKDHVNKNESLVNG----ISDAQGS---RMASIKAEADKVYTFTD 884

  Fly  1385 NPLQQQPGQAS-------VNPQTQQSPPRPPSHVQDQQTPSAYAQQAGLKTSPGFGSVGVGAASS 1442
            |......|.||       :|.|:.    .||..|..|.                      |..||
 Frog   885 NAPSPSIGSASRIECSTVINGQSS----IPPLSVLTQN----------------------GGDSS 923

  Fly  1443 KQKKNRKSPGPSDFEGRVSREDVQSPAYSDISDDSTPVAEQEMLD-KSVGQ-AVTAKHIELMGKK 1505
            ..|.|                   |||||||||    .|:....| :|.|| :.|:...|::..|
 Frog   924 ATKTN-------------------SPAYSDISD----AADDGGSDSRSEGQRSKTSSPSEIICNK 965

  Fly  1506 PTEVGVGVPPPPAPNMYVPGMYQFYPAQQQSAPP--PQQQQQQPQYMVQTEPGKPPGLPPALTQA 1568
            .|              .|.|.....|...|:..|  |......|.|.           |..:...
 Frog   966 DT--------------VVKGHSTSMPQSSQAKEPHSPYYHGYDPYYS-----------PSYVHSG 1005

  Fly  1569 QQQQQLQPGAPPPTSQPPSHLLGPPGQQSVAAHLADYSGKNKDPPLDLMTKPQPQPGQPPSQQQQ 1633
            |....|.....|  ||         |.:.......:...|:|...|| ..|.:......|||.| 
 Frog  1006 QVNNNLSVNTSP--SQ---------GLKIKKDTEDELEKKDKTDILD-CKKNEVISNNIPSQHQ- 1057

  Fly  1634 SGQLSGQENNGKDVGPPTSQPGSQPPPVNLSAVAGPPPGSLPPGLGGLSALGAAGLGGPGPGKGM 1698
                              |....:.|.:..|...|.                             
 Frog  1058 ------------------SVITQRHPALAQSLYYGQ----------------------------- 1075

  Fly  1699 PHFYPFNFIPPAYPYNVDPNFGSVSIVASEEAAKLSGHPGLPPSSQAQQLSGISIKE-ERLKESP 1762
               |       ||...:|..    |::||..|.:............|:|.:..:.:| ||     
 Frog  1076 ---Y-------AYGLYMDQK----SLIASNPAYRQQYEKYYEDQRMAEQKNAQNNRECER----- 1121

  Fly  1763 SPHDQPKHM---PSQQQMIASKLIKQEPMTKQEIKQEPN-SNPGQQHPPPQQQPAPQPQQQQPPP 1823
            .|.:.||..   .::.:.:.|..|.:.|.|.:..|.... .|..:...|.:.|..|..||.|...
 Frog  1122 KPDNVPKECAKDDNKLKTVPSATISKPPSTPEPSKSSSKMGNVNRTEDPMKSQVLPNHQQLQCDS 1186

  Fly  1824 PQPQQPHALHPKDLQALGAYPAIYQRHSINLAVQQAREEELRRYYMFTGRQNSAAAAAAAAAQNA 1888
            .:.:|                  .:.|.:   :::|.|                           
 Frog  1187 FKAKQ------------------MENHQL---IKEAVE--------------------------- 1203

  Fly  1889 ASGGLPPHPGMMHKDEPGMGSAAQQQQQQQQQQMQIAQQQQQAIQQHHQHLQ----QQHQAQQQQ 1949
                              |.|.....:|.........:|...:...||...|    :||:|.:.:
 Frog  1204 ------------------MKSVMDSMKQTGVDPTMRFKQDSDSRSWHHYVYQSKFLEQHKADELE 1250

  Fly  1950 QQQQHQQQQ-----QQQQQQQQQQQQQQQQQKLKQSQAASAGANNKATNLTKDSPKQKGGDDDQP 2009
            ::::.:::.     .:........|..:::::.|:..:.|....||:              ||:.
 Frog  1251 REKKLKEENVCRTPNKDSTMATTIQNIKEEKEAKRPDSQSVDEKNKS--------------DDRK 1301

  Fly  2010 LKVKQEGQKPTMETQGPPPPPTSQYFLHPSYISPTPFG--FDPNHPMYRNVLMSAAGPYNTAPYH 2072
            ..|   ..|.:...:.....|.||:..:..|:...|:.  :|||||.||     |..|.....| 
 Frog  1302 TPV---NWKDSRNARVAVSSPMSQHQSYIQYLHAYPYTQMYDPNHPAYR-----AVSPVLMHGY- 1357

  Fly  2073 LPIPRPYHAPEDLSRNTGTKALDALHHAASQYYTTHKIHELSERALKSPTSGSGPVKVSVSSPSI 2137
               |..|.:|                  ...:|:.:           ...||....:.|.:||||
 Frog  1358 ---PGAYLSP------------------GFPHYSVY-----------GKVSGRDEAEKSSTSPSI 1390

  Fly  2138 GPPQPGGPTSSGPGSGPVSGVLGPGSGSNQQPGSAPGSAGGVPLNLQPPPGGMGPSPGSKPDLSG 2202
                    .|..........:|  ...:||....:|..|                          
 Frog  1391 --------NSKSASESKALDLL--QQHANQYRTKSPALA-------------------------- 1419

  Fly  2203 PKGHGGVTPGSSLDGHKQSMPGGPPPNGPSGNGAVGGVGGAAGNGAAGGGGAGAADSRSPPPQRH 2267
                    ..:|.|..::|                                ....|..||..|||
 Frog  1420 --------EKASSDRERES--------------------------------ERERDRHSPFGQRH 1444

  Fly  2268 VHTHHHTHVGLGYPMYPAPY-------GAAVLASQQAAAVA 2301
            :|||||||||:|||:.|..|       .|.::|:||.||.|
 Frog  1445 LHTHHHTHVGVGYPLIPGQYDPFQGLTSATLVATQQVAAQA 1485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbbNP_001261074.1 PRK10856 <1143..>1245 CDD:236776 26/154 (17%)
znf608XP_004910537.1 SFP1 <506..587 CDD:227516 34/115 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 327 1.000 Domainoid score I1182
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I2426
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004207
OrthoInspector 1 1.000 - - otm49009
Panther 1 1.100 - - LDO PTHR21564
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.150

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