Protein Alignment nmd and DAA1

DIOPT Version :9

• Sequence 1: NP_001285801.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_001323399.1
• Gene: DAA1 / 842716
• AraportID: AT1G64110
• Length: 829
• Species: Arabidopsis thaliana
• Alignment Length: 406
• Identity: 129/406 - (31%)
• Similarity: 210/406 - (51%)
• Gaps: 76/406 - (18%)

  Fly    25 VASLITYYSVKWMMNQMDPTSKNKK----------------KAKVLAEEQLKRLAEQEGFK-LRG 72
            |.|.::|:    :||..||..:|.|                :.|....|:||:..::|..| ::.
plant   399 VVSALSYH----LMNNKDPEYRNGKLVISSISLSHGFSLFREGKAGGREKLKQKTKEESSKEVKA 459

  Fly    73 QEF-------------------------------------SDYELMIASHLVVPADITVSWADIA 100
            :..                                     :::|..|...::...:|.|::.||.
plant   460 ESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEVIPAEEINVTFKDIG 524

  Fly   101 GLDSVIQELRESVVLPIQHKDLFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDV 165
            .||.:.:.|:|.|:||::..|||. ..|.:..:|:||.||||.|||::|||.|||||..|||:.:
plant   525 ALDEIKESLQELVMLPLRRPDLFT-GGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSM 588

  Fly   166 AILTDKWYGESQKLTSAVFSLASRIEPCIIFIDEIDSFLRSR-NMNDHEATAMMKTQFMMLWDGL 229
            :.:|.||:||.:|...|:|:|||::.|.|||:||:||.|..| .:.:|||...:|.:||..||||
plant   589 STITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGL 653

  Fly   230 STNANSTVIVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQRKDILKLILQSEEVSQDVDLNRLS 294
            .|.....::|:.|||||.|||:||:||...:..:|||:...|:.||:.:|..|:|.:::|...|:
plant   654 MTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELA 718

  Fly   295 KLTNGFSGSDLREMCRNASVYRMRQLI-----------TSRDPSATALD---RNNVRITMDDLLG 345
            .:|.|::||||:.:|..|:...:|:||           ..|:|:....:   :....||:..|
plant   719 MMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAGEEDEGKEERVITLRPL-- 781

  Fly   346 SHLKIKESKMHTSSLF 361
            :....||:|...::.|
plant   782 NRQDFKEAKNQVAASF 797

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	67/134 (50%)
		AAA	135..265	CDD:278434	65/130 (50%)
DAA1	NP_001323399.1	P-loop_NTPase	522..687	CDD:422963	79/165 (48%)
		AAA_lid_3	711..755	CDD:407720	13/43 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1430018at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45644
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	6	5.880