Protein Alignment nmd and AT1G50140

DIOPT Version :9

• Sequence 1: NP_001285801.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_001319186.1
• Gene: AT1G50140 / 841436
• AraportID: AT1G50140
• Length: 1003
• Species: Arabidopsis thaliana
• Alignment Length: 311
• Identity: 122/311 - (39%)
• Similarity: 187/311 - (60%)
• Gaps: 13/311 - (4%)

  Fly    57 EQLKRLAEQEGFKLRGQEFSDYELMIASHLVVPADITVSWADIAGLDSVIQELRESVVLPIQHKD 121
            :.||.:|:.|           ||....|.:|.|.:|.|.:.||..|:.|.:.|.|.|:||::..:
plant   685 QNLKNIAKDE-----------YERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRRPE 738

  Fly   122 LFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSL 186
            ||....|.:..||:||.||||.||||:|||.|.|||..||::..:.||.||:|:::|||.|:||.
plant   739 LFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSF 803

  Fly   187 ASRIEPCIIFIDEIDSFLRSR-NMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLD 250
            |:::.|.|||:|||||.|.:| ..::||||..|:.:||..||||.:..:..::::||||||.|||
plant   804 ATKLAPVIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLD 868

  Fly   251 KAIVRRMPAQFHIGLPSETQRKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVY 315
            .|::||:|.:.::.||....|..|||:.|..|.:..|....:|:|.|.|:|||||:.:|..|:..
plant   869 DAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYR 933

  Fly   316 RMRQLITSRDPSATALDRNNVR-ITMDDLLGSHLKIKESKMHTSSLFLENR 365
            .:::|:......|.|.....:| :::||.:.|..|:..|..:.::...|.|
plant   934 PVQELLQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELR 984

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	68/134 (51%)
		AAA	135..265	CDD:278434	66/130 (51%)
AT1G50140	NP_001319186.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1430018at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	5	4.780