DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment nmd and AT5G53540

DIOPT Version :9

Sequence 1:	NP_001285801.1	Gene:	nmd / 44021	FlyBaseID:	FBgn0005322	Length:	369	Species:	Drosophila melanogaster
Sequence 2:	NP_200166.1	Gene:	AT5G53540 / 835436	AraportID:	AT5G53540	Length:	403	Species:	Arabidopsis thaliana

Alignment Length:	353	Identity:	134/353 - (37%)
Similarity:	224/353 - (63%)	Gaps:	11/353 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 QIFQVLVRLSVASLITYYSVKWMMNQMDPTSKNKKKAKVLAEEQLKRLAEQEGFKLRGQEFSDYE 79
            |:...:...:::||:.|..::    |:||.....||:.    |..:.:|::.|..|  .:.:.||
plant    15 QLILYVASAALSSLVLYVGLR----QLDPNRDAAKKSL----EHKREIAKRLGRPL--IQTNQYE 69

  Fly    80 LMIASHLVVPADITVSWADIAGLDSVIQELRESVVLPIQHKDLFKHSKLWQAPKGVLLHGPPGCG 144
            .:||..::.|..|.|.:..|.||:|:.|.|.|.|:||::..:||.:.||....|||||:||||.|
plant    70 DVIACDVINPLHIDVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTG 134

  Fly   145 KTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSLASRIEPCIIFIDEIDSFLRSRNM 209
            ||::|||.|:|:...|||:.|:.|..||:|::|||.|||||||.:::|.||||||:||||..|..
plant   135 KTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRS 199

  Fly   210 NDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQRKDI 274
            .|:||.:.|||:||.||||.:|:.|:.|:|:.|||||.:||:||:||.|..|.||:|...:|..|
plant   200 TDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQI 264

  Fly   275 LKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQLI-TSRDPSATALDRNNVRI 338
            ||::|:.|.|..|::.:|:::|...::|||:.|:|:.|:.:.:|::: ..::....::.|...::
plant   265 LKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKRVSVPRPLTQL 329

  Fly   339 TMDDLLGSHLKIKESKMHTSSLFLENRI 366
            .::.:|.:..|.:.:....:.|..::.:
plant   330 DLEKVLATSKKTQVAASEYTGLSSQSSV 357

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	78/133 (59%)
nmd	NP_001285801.1	AAA	135..265	CDD:278434	75/129 (58%)
AT5G53540	NP_200166.1	SpoVK	<69..341	CDD:223540	118/271 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	167	1.000	Domainoid score	I1188
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H5960
Inparanoid	1	1.050	265	1.000	Inparanoid score	I945
OMA	1	1.010	-	-		QHG53576
OrthoDB	1	1.010	-	-		D1430018at2759
OrthoFinder	1	1.000	-	-		FOG0002611
OrthoInspector	1	1.000	-	-		mtm1165
orthoMCL	1	0.900	-	-		OOG6_103164
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1716
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.740