Sequence 1: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102690.1 | Gene: | Pex1 / 500006 | RGDID: | 1559939 | Length: | 1283 | Species: | Rattus norvegicus |
Alignment Length: | 413 | Identity: | 104/413 - (25%) |
---|---|---|---|
Similarity: | 177/413 - (42%) | Gaps: | 95/413 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 GSDLSK-----------------GQIFQVLVRLSVASLITYYSVKWMMNQMDPTSKNKKKAKVLA 55
Fly 56 EEQLKRLAEQEGFKLRGQEFSDYELMIASHLVVPADI---------TVSWADIAGLDSVIQELRE 111
Fly 112 SVVLPIQHKDLFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGES 176
Fly 177 QKLTSAVFSLASRIEPCIIFIDEIDSFLRSRNMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMG 241
Fly 242 ATNRPQDLDKAIVR--RMPAQFHIGLPSETQRKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSD 304
Fly 305 LREMCRNASVYRMRQLI---------------------------TSRDPSA----TALDRNNVRI 338
Fly 339 TMDDLLGSHLKIKESKMHTSSLF 361 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 47/135 (35%) |
AAA | 135..265 | CDD:278434 | 46/131 (35%) | ||
Pex1 | NP_001102690.1 | PEX-2N | 19..98 | CDD:286362 | |
PEX-1N | 104..179 | CDD:286361 | |||
AAA | 591..741 | CDD:214640 | |||
AAA | 595..724 | CDD:278434 | |||
AAA | 877..1009 | CDD:214640 | 46/133 (35%) | ||
AAA | 877..1006 | CDD:278434 | 46/130 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |