Sequence 1: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651206.3 | Gene: | spas / 42846 | FlyBaseID: | FBgn0039141 | Length: | 758 | Species: | Drosophila melanogaster |
Alignment Length: | 288 | Identity: | 113/288 - (39%) |
---|---|---|---|
Similarity: | 177/288 - (61%) | Gaps: | 12/288 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 70 LRGQEFSDYELMIASHLVVPADITVSWADIAGLDSVIQELRESVVLPIQHKDLFKHSKLWQAP-K 133
Fly 134 GVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSLASRIEPCIIFID 198
Fly 199 EIDSFLRSRNMNDHEATAMMKTQFMMLWDGLSTNAN-STVIVMGATNRPQDLDKAIVRRMPAQFH 262
Fly 263 IGLPSETQRKDILKLILQSEEVSQDVD-LNRLSKLTNGFSGSDLREMCRNASVYRMRQLITSRDP 326
Fly 327 SATALDRNNVR-ITMDDLLGSHLKIKES 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 62/135 (46%) |
AAA | 135..265 | CDD:278434 | 59/130 (45%) | ||
spas | NP_651206.3 | MIT_spastin | 230..308 | CDD:239142 | |
P-loop_NTPase | 482..>538 | CDD:304359 | 30/58 (52%) | ||
AAA | 515..652 | CDD:214640 | 63/136 (46%) | ||
AAA | 519..650 | CDD:278434 | 59/130 (45%) | ||
Vps4_C | <722..754 | CDD:286426 | 6/16 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467078 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |