Protein Alignment nmd and kat-60L1

DIOPT Version :9

• Sequence 1: NP_001285801.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_001163523.1
• Gene: kat-60L1 / 40715
• FlyBaseID: FBgn0037375
• Length: 673
• Species: Drosophila melanogaster
• Alignment Length: 301
• Identity: 113/301 - (37%)
• Similarity: 168/301 - (55%)
• Gaps: 23/301 - (7%)

  Fly    69 KLRGQEFS--DYELMIASHLV--VPADI-----TVSWADIAGLDSVIQELRESVVLPIQHKDLFK 124
            |.:.:.||  .||:    |||  :..||     .:.|.|:|||:.....|:|:||||:...:.||
  Fly   361 KTKAKHFSPLGYEV----HLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFK 421

  Fly   125 H-SKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSLAS 188
            . .:.|   :|||:.||||.|||::|||.|.|.|..|.|:..:.||.|:.|||:||...:|.:|.
  Fly   422 GIRRPW---RGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMAR 483

  Fly   189 RIEPCIIFIDEIDSFLRSRNM-NDHEATAMMKTQFMMLWDGL--STNANSTVIVMGATNRPQDLD 250
            ...|..|||||||:...||.. ::|||:...|.:.::..|||  |......::|:.|||.|.|:|
  Fly   484 FYAPSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDID 548

  Fly   251 KAIVRRMPAQFHIGLPSETQRKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVY 315
            :|..||...:.:|.||:|..|..:|||.|:...:|..::...:.....|:||||:..:||:||:.
  Fly   549 EAFRRRFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMM 613

  Fly   316 RMRQLITSRDP-SATALDRNNV--RITMDDLLGSHLKIKES 353
            .||:||:.|.| ....:.|..|  .||:.|...:.|:.|:|
  Fly   614 AMRRLISGRTPDQIKQIRREEVDQPITLQDFQDARLRTKKS 654

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	57/136 (42%)
		AAA	135..265	CDD:278434	56/132 (42%)
kat-60L1	NP_001163523.1	AAA	426..565	CDD:214640	59/141 (42%)
		AAA	430..563	CDD:278434	56/132 (42%)
		Vps4_C	<638..671	CDD:286426	6/17 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467084
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840