Sequence 1: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523959.2 | Gene: | smid / 38824 | FlyBaseID: | FBgn0016983 | Length: | 944 | Species: | Drosophila melanogaster |
Alignment Length: | 288 | Identity: | 96/288 - (33%) |
---|---|---|---|
Similarity: | 155/288 - (53%) | Gaps: | 42/288 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 AEQEGFKLRGQEFSDYELMIASHLVVPADITVSWADIAGLDSVIQELRESVVLPIQHKDLFKHSK 127
Fly 128 LWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSLASRIEP 192
Fly 193 CIIFIDEIDSFL--RSRNMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVR 255
Fly 256 --RMPAQFHIGLPSETQRKDILKLILQSEE---VSQDVDLNRLSKLTNGFSGSDLREMCRNASVY 315
Fly 316 RMRQLITSRDPSATALDRNNVRITMDDL 343 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 55/137 (40%) |
AAA | 135..265 | CDD:278434 | 52/133 (39%) | ||
smid | NP_523959.2 | Nucleolin_bd | 2..71 | CDD:293330 | |
SpoVK | 271..919 | CDD:223540 | 96/288 (33%) | ||
AAA | 287..418 | CDD:278434 | |||
P-loop_NTPase | 679..>716 | CDD:304359 | 19/37 (51%) | ||
AAA | 699..830 | CDD:278434 | 52/132 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |