Sequence 1: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_958889.1 | Gene: | vcp / 327197 | ZFINID: | ZDB-GENE-030131-5408 | Length: | 806 | Species: | Danio rerio |
Alignment Length: | 322 | Identity: | 112/322 - (34%) |
---|---|---|---|
Similarity: | 168/322 - (52%) | Gaps: | 57/322 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 ITYYSVKWMMNQMDPTSKNKKKAKVLAEEQLKRLAEQEGFKLRGQEFSDYELMIASHLVVPADIT 93
Fly 94 VSWADIAGLDSVIQELRESVVLPIQHKDLFKHSKLWQAP-KGVLLHGPPGCGKTLIAKATAKEAG 157
Fly 158 MRFINLDVAILTDKWYGESQKLTSAVFSLASRIEPCIIFIDEIDSFLRSR--NMNDHEATA-MMK 219
Fly 220 TQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVR--RMPAQFHIGLPSETQRKDILKLILQSE 282
Fly 283 EVSQDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQLITSR---------DPSATALDRNN 335 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 57/139 (41%) |
AAA | 135..265 | CDD:278434 | 54/134 (40%) | ||
vcp | NP_958889.1 | CDC48 | 25..764 | CDD:273521 | 112/322 (35%) |
CDC48_N | 25..107 | CDD:280513 | |||
CDC48_2 | 131..191 | CDD:215011 | |||
AAA | 241..370 | CDD:278434 | |||
P-loop_NTPase | 452..>534 | CDD:304359 | 41/121 (34%) | ||
AAA | 514..647 | CDD:278434 | 54/134 (40%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 708..727 | 3/19 (16%) | |||
Vps4_C | <718..760 | CDD:286426 | 2/9 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 768..806 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |