Sequence 1: | NP_001285801.1 | Gene: | nmd / 44021 | FlyBaseID: | FBgn0005322 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011930.1 | Gene: | Trip13 / 292206 | RGDID: | 1308516 | Length: | 432 | Species: | Rattus norvegicus |
Alignment Length: | 406 | Identity: | 96/406 - (23%) |
---|---|---|---|
Similarity: | 158/406 - (38%) | Gaps: | 95/406 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 GSDLSKGQIFQVLVRLSVASLITYYSVKWMMNQMDPTSKNKKKAKVLAEEQLKRLAEQ------- 65
Fly 66 -----------EGFKLRGQEFSDYELMIASHLVVPADITVSWADIAGL-DSVIQE------LRES 112
Fly 113 VVLPIQHKDLFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMR---------FINLDVAIL 168
Fly 169 TDKWYGESQKLTSAVFSLASRIEPCI--------IFIDEIDSFLRSRN-----MNDHEATAMMKT 220
Fly 221 QFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQRKDILKLILQSEEVS 285
Fly 286 QDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQLITSRDPSATALDRNNVRITMDDLLGSHLKI 350
Fly 351 KESKMHTSSLFLENRI 366 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nmd | NP_001285801.1 | AAA | 132..266 | CDD:214640 | 43/155 (28%) |
AAA | 135..265 | CDD:278434 | 42/151 (28%) | ||
Trip13 | NP_001011930.1 | RecA-like_Pch2-like | 121..319 | CDD:410916 | 57/209 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |