Protein Alignment nmd and fign

DIOPT Version :9

• Sequence 1: NP_001285801.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: XP_004917757.1
• Gene: fign / 100488151
• XenbaseID: XB-GENE-1011106
• Length: 783
• Species: Xenopus tropicalis
• Alignment Length: 313
• Identity: 92/313 - (29%)
• Similarity: 156/313 - (49%)
• Gaps: 27/313 - (8%)

  Fly    44 TSKNKKKAKVLAEEQLKRLAEQEGFKLRGQEFSDYELM-IASHLVVPADITVSWADIAGLDSVIQ 107
            ||.|..     .::|||.              :|..|: :.::.::.....|.|.:|||||.|..
 Frog   475 TSSNHS-----VDDQLKN--------------TDSHLIDLVTNEIINQGHPVDWDEIAGLDLVKA 520

  Fly   108 ELRESVVLPIQHKDLFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKW 172
            .::|.|:.|:...|.|  |.|...|:.:||.||.|.||||:.:..|.:.|..|..:..:.|..||
 Frog   521 FIKEEVLWPVIRSDAF--SGLTALPRSILLFGPRGTGKTLLGRCIASQLGATFFKISASNLVTKW 583

  Fly   173 YGESQKLTSAVFSLASRIEPCIIFIDEIDSFLRSRNMNDHEATAMMKTQFMMLWDGLSTNANSTV 237
            ..|.:|:..|.|.:|...:|.:||:.:||..|.|:...:|...:.|:|:|:|..|.:.::|...:
 Frog   584 ITEGEKIVHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHSPISRMRTEFLMQLDTVLSSAEDQI 648

  Fly   238 IVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQRKD-ILKLILQSEEVSQDVDLNRLSKLTNGFS 301
            :|:.||::|:.:|:::.|....:..|.||..|.|.. |::|:.|......|.::..|.:.|.|||
 Frog   649 VVICATSKPEQIDESLRRYFMKRLLIPLPDSTARHQIIIQLLSQHNYCLNDKEVALLVQRTEGFS 713

  Fly   302 GSDLREMCRNASVYRMRQLITSRDPSATALDRNNVR-ITMDDLLGSHLKIKES 353
            |.|:..:|:.|.|..:..:..|   ..:|:..|.:| :|..|......||:.|
 Frog   714 GLDVARLCQEAVVGPLHAIPPS---DLSAIMPNQLRPVTYQDFENVFCKIQPS 763

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	42/133 (32%)
		AAA	135..265	CDD:278434	41/129 (32%)
fign	XP_004917757.1	SpoVK	<507..770	CDD:223540	84/262 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910