Protein Alignment nmd and atad1

DIOPT Version :9

• Sequence 1: NP_001285801.1
• Gene: nmd / 44021
• FlyBaseID: FBgn0005322
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_001135501.1
• Gene: atad1 / 100216041
• XenbaseID: XB-GENE-5779938
• Length: 360
• Species: Xenopus tropicalis
• Alignment Length: 360
• Identity: 193/360 - (53%)
• Similarity: 263/360 - (73%)
• Gaps: 11/360 - (3%)

  Fly    11 LSKGQIFQVLVRLSVASLITYYSVKWMMNQMDPTSKNKKKAKVLAEEQLKRLAEQEGFKLRGQEF 75
            ||:.::..::.||::...:||:::|||::.:|||    :|.||.|::|.::|..|.|.|  ..:.
 Frog    11 LSRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPT----RKQKVEAQKQAEKLMRQIGVK--NVKL 69

  Fly    76 SDYELMIASHLVVPADITVSWADIAGLDSVIQELRESVVLPIQHKDLFKHSKLWQAPKGVLLHGP 140
            ::||:.||:|||.|..:.|:|:||||||.||.:|:::|:|||:.:.||::|:|.|.||||||:||
 Frog    70 TEYEMSIAAHLVDPLSMLVTWSDIAGLDDVITDLKDTVILPIRKRYLFENSRLLQPPKGVLLYGP 134

  Fly   141 PGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGESQKLTSAVFSLASRIEPCIIFIDEIDSFLR 205
            ||||||:||||||||||.|||||..:.||||||||||||.:||||||.::.|.||||||||||||
 Frog   135 PGCGKTMIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAVKLHPSIIFIDEIDSFLR 199

  Fly   206 SRNMNDHEATAMMKTQFMMLWDGLSTNANSTVIVMGATNRPQDLDKAIVRRMPAQFHIGLPSETQ 270
            ||:.:|||||||||.|||.|||||.|:.|..||||||||||||||.||:||||.:|||..||..|
 Frog   200 SRSSSDHEATAMMKAQFMSLWDGLDTDFNCQVIVMGATNRPQDLDTAIMRRMPTRFHINQPSLKQ 264

  Fly   271 RKDILKLILQSEEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQLITSRDPSATALDRNN 335
            |:.||.|||::|.|...|||..:::.::|||||||:||||:|::..:|..:.:....:..   ..
 Frog   265 REAILDLILRNESVDSHVDLMEIARGSDGFSGSDLKEMCRDAALLCVRDSVNNSSEESPC---EE 326

  Fly   336 VR-ITMDDLLGSHLKIKESKMHTSSLFLENRIELD 369
            :| |...|||.:..|:|.||..|:...|.: :.||
 Frog   327 IRPIHQQDLLRAIDKMKRSKSATNQNVLMH-VSLD 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmd	NP_001285801.1	AAA	132..266	CDD:214640	104/133 (78%)
		AAA	135..265	CDD:278434	101/129 (78%)
atad1	NP_001135501.1	AAA	125..254	CDD:214640	101/128 (79%)
		AAA	129..257	CDD:278434	99/127 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	208	1.000	Domainoid score	I2804
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H5960
Inparanoid	1	1.050	366	1.000	Inparanoid score	I2106
OMA	1	1.010	-	-		QHG53576
OrthoDB	1	1.010	-	-		D1430018at2759
OrthoFinder	1	1.000	-	-		FOG0002611
OrthoInspector	1	1.000	-	-		mtm9357
Panther	1	1.100	-	-	LDO	PTHR45644
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1910
SonicParanoid	1	1.000	-	-		X1716
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	13.110